RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 MAGEA9P43362 315 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 EIF3EP60228 445 aaKnown RBP17.09■□□□□ 0.33
EPHB4-204ENST00000477446 ZNF33AQ06730 810 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 SLC10A7Q0GE19 358 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 AP1B1Q10567 949 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 XRCC4Q13426 336 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 LBRQ14739 615 aaKnown RBP17.09■□□□□ 0.33
EPHB4-204ENST00000477446 PRKD1Q15139 912 aaPredicted RBP17.09■□□□□ 0.33
EPHB4-204ENST00000477446 CYTH1Q15438 398 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 HNRNPA1L2Q32P51 320 aaKnown RBP17.09■□□□□ 0.33
EPHB4-204ENST00000477446 SYT13Q7L8C5 426 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 SPATS2Q86XZ4 545 aaKnown RBP17.09■□□□□ 0.33
EPHB4-204ENST00000477446 CCDC13Q8IYE1 715 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 SPEM1Q8N4L4 309 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 TFB1MQ8WVM0 346 aaKnown RBP17.09■□□□□ 0.33
EPHB4-204ENST00000477446 PTPRN2Q92932 1015 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 ERLEC1Q96DZ1 483 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 ZNF599Q96NL3 588 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 RBM15Q96T37 977 aaKnown RBP eCLIP17.09■□□□□ 0.335e-11■■□□□ 11.5
EPHB4-204ENST00000477446 TMEM121Q9BTD3 319 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 CEP44Q9C0F1 390 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 NINJ2Q9NZG7 142 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 SUN2Q9UH99 717 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 SLC8A2Q9UPR5 921 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.08■□□□□ 0.32
EPHB4-204ENST00000477446 A0A1W2PQF6 199 aa17.08■□□□□ 0.32
EPHB4-204ENST00000477446 ALOX15BO15296 676 aa17.08■□□□□ 0.32
EPHB4-204ENST00000477446 HOXB2P14652 356 aa17.08■□□□□ 0.32
EPHB4-204ENST00000477446 MMP13P45452 471 aa17.08■□□□□ 0.32
EPHB4-204ENST00000477446 GUCY1A3Q02108 690 aa17.08■□□□□ 0.32
EPHB4-204ENST00000477446 RFTN1Q14699 578 aaPredicted RBP17.08■□□□□ 0.32
EPHB4-204ENST00000477446 KYNUQ16719 465 aa17.08■□□□□ 0.32
EPHB4-204ENST00000477446 RNASEH2BQ5TBB1 312 aaKnown RBP17.08■□□□□ 0.32
EPHB4-204ENST00000477446 TMCO4Q5TGY1 634 aa17.08■□□□□ 0.32
EPHB4-204ENST00000477446 KIAA1211LQ6NV74 962 aa17.08■□□□□ 0.32
EPHB4-204ENST00000477446 C22orf39Q6P5X5 142 aa17.08■□□□□ 0.32
EPHB4-204ENST00000477446 TMEM92Q6UXU6 159 aa17.08■□□□□ 0.32
EPHB4-204ENST00000477446 C4orf22Q6V702 233 aa17.08■□□□□ 0.32
EPHB4-204ENST00000477446 Q6ZVU0 165 aa17.08■□□□□ 0.32
EPHB4-204ENST00000477446 CENPUQ71F23 418 aa17.08■□□□□ 0.32
EPHB4-204ENST00000477446 METTL3Q86U44 580 aaKnown RBP17.08■□□□□ 0.32
EPHB4-204ENST00000477446 PPIL6Q8IXY8 311 aa17.08■□□□□ 0.32
EPHB4-204ENST00000477446 MAML1Q92585 1016 aa17.08■□□□□ 0.32
EPHB4-204ENST00000477446 FATE1Q969F0 183 aa17.08■□□□□ 0.32
EPHB4-204ENST00000477446 ISG20Q96AZ6 181 aaKnown RBP17.08■□□□□ 0.32
EPHB4-204ENST00000477446 IER2Q9BTL4 223 aa17.08■□□□□ 0.32
EPHB4-204ENST00000477446 TNKS2Q9H2K2 1166 aa17.08■□□□□ 0.32
EPHB4-204ENST00000477446 A0A087WUV0 522 aaPredicted RBP17.07■□□□□ 0.32
EPHB4-204ENST00000477446 EDDM13A0A1B0GTR0 161 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 HACD1B0YJ81 288 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 H7C0C1 242 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 KCNK1O00180 336 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 SIN3BO75182 1162 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 ACSL3O95573 720 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 RBP3P10745 1247 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 CCNB1P14635 433 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 COL9A1P20849 921 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 ATP5OP48047 213 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 HNRNPDQ14103 355 aaKnown RBP17.07■□□□□ 0.32
EPHB4-204ENST00000477446 CRY1Q16526 586 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 SLC45A4Q5BKX6 768 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 C9orf64Q5T6V5 341 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 MARC1Q5VT66 337 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 PCDH20Q8N6Y1 951 aaKnown RBP17.07■□□□□ 0.32
EPHB4-204ENST00000477446 NSMCE1Q8WV22 266 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 ZNF419Q96HQ0 510 aaPredicted RBP17.07■□□□□ 0.32
EPHB4-204ENST00000477446 QKIQ96PU8 341 aaKnown RBP eCLIP17.07■□□□□ 0.327e-9■■■■■ 39.1
EPHB4-204ENST00000477446 FAM107BQ9H098 131 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 C10orf88Q9H8K7 445 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 CD248Q9HCU0 757 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 PRSS16Q9NQE7 514 aa17.07■□□□□ 0.32
EPHB4-204ENST00000477446 EBAG9O00559 213 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 BNIP3LO60238 219 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 SYNCRIPO60506 623 aaKnown RBP17.06■□□□□ 0.32
EPHB4-204ENST00000477446 GPR37L1O60883 481 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 IFNB1P01574 187 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 TSHRP16473 764 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 RENBPP51606 427 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 RHOAP61586 193 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 CBLBQ13191 982 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 CAMK2GQ13555 558 aaPredicted RBP17.06■□□□□ 0.32
EPHB4-204ENST00000477446 FAM182AQ5T1J6 154 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 TEX26Q8N6G2 289 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 OR2A12Q8NGT7 310 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 CINPQ9BW66 212 aaPredicted RBP17.06■□□□□ 0.32
EPHB4-204ENST00000477446 FRMD8Q9BZ67 464 aaPredicted RBP17.06■□□□□ 0.32
EPHB4-204ENST00000477446 TM6SF2Q9BZW4 377 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 LHX3Q9UBR4 397 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 SEPT3Q9UH03 358 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 LGALS13Q9UHV8 139 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 FARP1Q9Y4F1 1045 aaPredicted RBP17.06■□□□□ 0.32
EPHB4-204ENST00000477446 ZDBF2Q9HCK1 2354 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 GMNCA6NCL1 334 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 E7EVH7 732 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 NDUFAB1O14561 156 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 MUSKO15146 869 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 CDH16O75309 829 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 ZSCAN5DPP0CG00 497 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 RBL1P28749 1068 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 ARL4CP56559 192 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms