RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 WASHC2DQ5SRD0 308 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 RBM20Q5T481 1227 aaKnown RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 GRAMD4Q6IC98 578 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 NOTUMQ6P988 496 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 DET1Q7L5Y6 550 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 C11orf96Q7Z7L8 435 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 STK32CQ86UX6 486 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 METTL23Q86XA0 190 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 SNX29P2Q8IUI4 249 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 DSELQ8IZU8 1212 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 CDYL2Q8N8U2 506 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 PPHLN1Q8NEY8 458 aaKnown RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 HDAC10Q969S8 669 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 FBXL8Q96CD0 374 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 DCUN1D1Q96GG9 259 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 SENP8Q96LD8 212 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 C12orf42Q96LP6 360 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 PPM1MQ96MI6 270 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 SPATA13Q96N96 652 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 TUBB6Q9BUF5 446 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 MCOLN1Q9GZU1 580 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 PDZD7Q9H5P4 517 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 LRRC40Q9H9A6 602 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 CASS4Q9NQ75 786 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 PRDM8Q9NQV8 689 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 SAR1AQ9NR31 198 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 KANSL3Q9P2N6 904 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 STX18Q9P2W9 335 aaKnown RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 COPG2Q9UBF2 871 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 AASSQ9UDR5 926 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 PAPPA2Q9BXP8 1791 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 BRCA1P38398 1863 aaKnown RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 ASXL3Q9C0F0 2248 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 TLR5O60602 858 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 LSM8O95777 96 aaKnown RBP5.03□□□□□ -1.6
CCDC39-204ENST00000476379 ALDOAP04075 364 aaKnown RBP5.03□□□□□ -1.6
CCDC39-204ENST00000476379 NTRK1P04629 796 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 MMP3P08254 477 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 HSMCR30P0CW71 290 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 CTPS1P17812 591 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 GPR15P49685 360 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 CLCNKBP51801 687 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 PPIDQ08752 370 aaKnown RBP5.03□□□□□ -1.6
CCDC39-204ENST00000476379 LAPTM5Q13571 262 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 NFYCQ13952 458 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 GRB14Q14449 540 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 MFSD10Q14728 455 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 TMEM214Q6NUQ4 689 aaKnown RBP5.03□□□□□ -1.6
CCDC39-204ENST00000476379 LRRC8BQ6P9F7 803 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 TSHZ1Q6ZSZ6 1077 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 RAB44Q7Z6P3 723 aaPredicted RBP5.03□□□□□ -1.6
CCDC39-204ENST00000476379 ANKRD46Q86W74 232 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 HS6ST3Q8IZP7 471 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.03□□□□□ -1.6
CCDC39-204ENST00000476379 B3GALNT2Q8NCR0 500 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 BPIFB6Q8NFQ5 453 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 ULK4Q96C45 1275 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 MTG1Q9BT17 334 aaPredicted RBP5.03□□□□□ -1.6
CCDC39-204ENST00000476379 OCEL1Q9H607 264 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 MARCH7Q9H992 704 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 AGO3Q9H9G7 860 aaKnown RBP5.03□□□□□ -1.6
CCDC39-204ENST00000476379 POPDC2Q9HBU9 364 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 ZDHHC2Q9UIJ5 367 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 COQ4Q9Y3A0 265 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 CACNA1IQ9P0X4 2223 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 NINQ8N4C6 2090 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 SLC12A8A0AV02 714 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 ASB14A6NK59 587 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 RFXAPO00287 272 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 ZBTB14O43829 449 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 PLIN3O60664 434 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 SRP72O76094 671 aaKnown RBP5.03□□□□□ -1.6
CCDC39-204ENST00000476379 FKBP9O95302 570 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 ZNF682O95780 498 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 ALADP13716 330 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 RPL17P18621 184 aaKnown RBP5.03□□□□□ -1.6
CCDC39-204ENST00000476379 PBLDP30039 288 aaPredicted RBP5.03□□□□□ -1.6
CCDC39-204ENST00000476379 ICAM3P32942 547 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 ARL2P36404 184 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 SERPINB8P50452 374 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 TAS2R39P59534 338 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 PRKD1Q15139 912 aaPredicted RBP5.03□□□□□ -1.6
CCDC39-204ENST00000476379 PSMD5Q16401 504 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 CNPY1Q3B7I2 92 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 SLC39A12Q504Y0 691 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 IL23RQ5VWK5 629 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 IQSEC1Q6DN90 963 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 FKBP9P1Q75LS8 142 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 GALNT5Q7Z7M9 940 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 RBM23Q86U06 439 aaKnown RBP5.03□□□□□ -1.6
CCDC39-204ENST00000476379 LSRQ86X29 649 aaPredicted RBP5.03□□□□□ -1.6
CCDC39-204ENST00000476379 CPNE9Q8IYJ1 553 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 FSTL5Q8N475 847 aaPredicted RBP5.03□□□□□ -1.6
CCDC39-204ENST00000476379 C2orf73Q8N5S3 287 aaPredicted RBP5.03□□□□□ -1.6
CCDC39-204ENST00000476379 LPCAT1Q8NF37 534 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 NKD2Q969F2 451 aaPredicted RBP5.03□□□□□ -1.6
CCDC39-204ENST00000476379 TMIGD2Q96BF3 282 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 SDCCAG3Q96C92 435 aa5.03□□□□□ -1.6
CCDC39-204ENST00000476379 FCRL3Q96P31 734 aaPredicted RBP5.03□□□□□ -1.6
CCDC39-204ENST00000476379 TMEM209Q96SK2 561 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms