RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ITPKBP27987 946 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 DUSP1P28562 367 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 PRKCIP41743 596 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 CCR10P46092 362 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 CAMPP49913 170 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 POLGP54098 1239 aaPredicted RBP4.35□□□□□ -1.71
VPS13D-207ENST00000476169 CSE1LP55060 971 aaKnown RBP4.35□□□□□ -1.71
VPS13D-207ENST00000476169 HSD17B7P56937 341 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 EEFSECP57772 596 aaKnown RBP4.35□□□□□ -1.71
VPS13D-207ENST00000476169 ALCAMQ13740 583 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 RCN2Q14257 317 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 PPP2R5BQ15173 497 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 CDSNQ15517 529 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 C15orf59Q2T9L4 293 aaPredicted RBP4.35□□□□□ -1.71
VPS13D-207ENST00000476169 ASTE1Q2TB18 679 aaPredicted RBP4.35□□□□□ -1.71
VPS13D-207ENST00000476169 EDRF1Q3B7T1 1238 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 C5orf22Q49AR2 442 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 MPP7Q5T2T1 576 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 CST9LP1Q5W188 147 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 ATG9BQ674R7 924 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 HMBOX1Q6NT76 420 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 ANKRD16Q6P6B7 361 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 GJB7Q6PEY0 223 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 TMEM88Q6PEY1 159 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 SUSD1Q6UWL2 747 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 PEG10Q86TG7 708 aaKnown RBP4.35□□□□□ -1.71
VPS13D-207ENST00000476169 GPAT4Q86UL3 456 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 FAM160B2Q86V87 743 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 NLRP14Q86W24 1093 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 TUSC5Q8IXB3 177 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 FAM185AQ8N0U4 392 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 SIX6OS1Q8N1H7 587 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 C12orf76Q8N812 135 aaPredicted RBP4.35□□□□□ -1.71
VPS13D-207ENST00000476169 BEND2Q8NDZ0 799 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 SRFBP1Q8NEF9 429 aaKnown RBP4.35□□□□□ -1.71
VPS13D-207ENST00000476169 NEK9Q8TD19 979 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 NSMCE1Q8WV22 266 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 TAF4BQ92750 862 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 ATP6V0A1Q93050 837 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 PTP4A1Q93096 173 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 PTERQ96BW5 349 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 TMCO6Q96DC7 493 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 MMABQ96EY8 250 aaPredicted RBP4.35□□□□□ -1.71
VPS13D-207ENST00000476169 EDC3Q96F86 508 aaKnown RBP4.35□□□□□ -1.71
VPS13D-207ENST00000476169 ELMOD3Q96FG2 381 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 RUNDC3BQ96NL0 473 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 SNX18Q96RF0 628 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 NPAS1Q99742 590 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 TUBB6Q9BUF5 446 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 MLST8Q9BVC4 326 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 KIFC3Q9BVG8 833 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 STRA6Q9BX79 667 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 FSD1LQ9BXM9 530 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 MRPL1Q9BYD6 325 aaKnown RBP4.35□□□□□ -1.71
VPS13D-207ENST00000476169 HRH4Q9H3N8 390 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 OSGEPL1Q9H4B0 414 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 THAP9Q9H5L6 903 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 KIF9Q9HAQ2 790 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 SERTAD4Q9NUC0 356 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 HPF1Q9NWY4 346 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 KIAA1456Q9P272 454 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 AMACRQ9UHK6 382 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 HAO1Q9UJM8 370 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 PADI1Q9ULC6 663 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 TSC22D4Q9Y3Q8 395 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 DCAF1Q9Y4B6 1507 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 A0A1W2PQF6 199 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 A4D1N5 150 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 KRT87PA6NCN2 255 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 NDUFS3O75489 264 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 C22orf31O95567 290 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 MBPP02686 304 aaPredicted RBP4.34□□□□□ -1.71
VPS13D-207ENST00000476169 FYNP06241 537 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 TPOP07202 933 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 HKR1P10072 659 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 IRF1P10914 325 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 IL7RP16871 459 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 ZNF20P17024 532 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 SCP2P22307 547 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 SLC8A1P32418 973 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 MC5RP33032 325 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 TCF7P36402 384 aaPredicted RBP4.34□□□□□ -1.71
VPS13D-207ENST00000476169 PTPN9P43378 593 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 CAPZA1P52907 286 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 COPB1P53618 953 aaKnown RBP4.34□□□□□ -1.71
VPS13D-207ENST00000476169 TPD52P55327 224 aaPredicted RBP4.34□□□□□ -1.71
VPS13D-207ENST00000476169 MRPS5P82675 430 aaKnown RBP4.34□□□□□ -1.71
VPS13D-207ENST00000476169 DGCR2P98153 550 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 TUBA3CQ13748 450 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 PTPAQ15257 358 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 FBXO43Q4G163 708 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 NHSL2Q5HYW2 709 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 PCID2Q5JVF3 399 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 LAIR1Q6GTX8 287 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 TUBA3EQ6PEY2 450 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 KYAT3Q6YP21 454 aaKnown RBP4.34□□□□□ -1.71
VPS13D-207ENST00000476169 MOB3CQ70IA8 216 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 OTOAQ7RTW8 1153 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 NUP54Q7Z3B4 507 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 ADCK2Q7Z695 626 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms