RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 ANXA9O76027 345 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 SUN1O94901 812 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 TTC4O95801 387 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 POLR2EP19388 210 aaKnown RBP18.29■□□□□ 0.52
ATG4B-217ENST00000475693 DLG2Q15700 870 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 PTPRNQ16849 979 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 INO80DQ53TQ3 878 aaPredicted RBP18.29■□□□□ 0.52
ATG4B-217ENST00000475693 KIAA0907Q7Z7F0 614 aaPredicted RBP18.29■□□□□ 0.52
ATG4B-217ENST00000475693 RYBPQ8N488 228 aaPredicted RBP18.29■□□□□ 0.52
ATG4B-217ENST00000475693 ZNF778Q96MU6 729 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 FAM129AQ9BZQ8 928 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 EPN3Q9H201 632 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 VPS37BQ9H9H4 285 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 KCNK12Q9HB15 430 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 EIF2B3Q9NR50 452 aaKnown RBP18.29■□□□□ 0.52
ATG4B-217ENST00000475693 DEC1Q9P2X7 70 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 COL4A3Q01955 1670 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 PIGNO95427 931 aa18.28■□□□□ 0.52
ATG4B-217ENST00000475693 F7P08709 466 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-217ENST00000475693 GEMP55040 296 aa18.28■□□□□ 0.52
ATG4B-217ENST00000475693 POU6F1Q14863 301 aa18.28■□□□□ 0.52
ATG4B-217ENST00000475693 RANBP10Q6VN20 620 aa18.28■□□□□ 0.52
ATG4B-217ENST00000475693 Q6ZVU0 165 aa18.28■□□□□ 0.52
ATG4B-217ENST00000475693 CAMK1DQ8IU85 385 aa18.28■□□□□ 0.52
ATG4B-217ENST00000475693 SH2D3CQ8N5H7 860 aa18.28■□□□□ 0.52
ATG4B-217ENST00000475693 MRGPRX3Q96LB0 322 aa18.28■□□□□ 0.52
ATG4B-217ENST00000475693 LRRC40Q9H9A6 602 aa18.28■□□□□ 0.52
ATG4B-217ENST00000475693 CASS4Q9NQ75 786 aa18.28■□□□□ 0.52
ATG4B-217ENST00000475693 ERVW-1Q9UQF0 538 aa18.28■□□□□ 0.52
ATG4B-217ENST00000475693 NFS1Q9Y697 457 aa18.28■□□□□ 0.52
ATG4B-217ENST00000475693 ANKRD65E5RJM6 399 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 NARSO43776 548 aaKnown RBP18.27■□□□□ 0.52
ATG4B-217ENST00000475693 SMAD4Q13485 552 aaKnown RBP18.27■□□□□ 0.52
ATG4B-217ENST00000475693 RFTN1Q14699 578 aaPredicted RBP18.27■□□□□ 0.52
ATG4B-217ENST00000475693 EFTUD2Q15029 972 aaKnown RBP eCLIP18.27■□□□□ 0.524e-9■■■□□ 14.7
ATG4B-217ENST00000475693 SKIDA1Q1XH10 827 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 AHI1Q8N157 1196 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 VOPP1Q96AW1 172 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 TADA1Q96BN2 335 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 MYO19Q96H55 970 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 ATP6V1G3Q96LB4 118 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 CHRAC1Q9NRG0 131 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 HLA-EP13747 358 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 IL9P15248 144 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 LSP1P33241 339 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 SLCO1A2P46721 670 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 GTF2A1P52655 376 aaPredicted RBP18.27■□□□□ 0.52
ATG4B-217ENST00000475693 TRAF2Q12933 501 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 SLC12A1Q13621 1099 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 SIRPB2Q5JXA9 342 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 TXNDC11Q6PKC3 985 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 C3orf62Q6ZUJ4 267 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 PALM2Q8IXS6 379 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 KLHDC8BQ8IXV7 354 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 BBS5Q8N3I7 341 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 CPA6Q8N4T0 437 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 ARFGAP2Q8N6H7 521 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 CHST14Q8NCH0 376 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 E2F7Q96AV8 911 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 HCN2Q9UL51 889 aa18.27■□□□□ 0.52
ATG4B-217ENST00000475693 TBC1D3BA6NDS4 549 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 FOXO6A8MYZ6 492 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 BUD23O43709 281 aaKnown RBP18.26■□□□□ 0.51
ATG4B-217ENST00000475693 PRLP01236 227 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 SERPINF2P08697 491 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 SLC8A1P32418 973 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 CDK16Q00536 496 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 SEMG2Q02383 582 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 MPP3Q13368 585 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 GRAMD4Q6IC98 578 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 PHTF2Q8N3S3 785 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 TTC17Q96AE7 1141 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 ACOX2Q99424 681 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 SLC2A11Q9BYW1 496 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 XAB2Q9HCS7 855 aaKnown RBP18.26■□□□□ 0.51
ATG4B-217ENST00000475693 ELOVL2Q9NXB9 296 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 ZC3H7BQ9UGR2 993 aaKnown RBP18.26■□□□□ 0.51
ATG4B-217ENST00000475693 HS3ST2Q9Y278 367 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 RAI2Q9Y5P3 530 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 FSBPO95073 299 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 ATXN1LP0C7T5 689 aaKnown RBP18.26■□□□□ 0.51
ATG4B-217ENST00000475693 NR1D1P20393 614 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 SARNPP82979 210 aaKnown RBP18.26■□□□□ 0.51
ATG4B-217ENST00000475693 PPARDQ03181 441 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 ITPRIPL2Q3MIP1 535 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 ALG1LQ6GMV1 187 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 NCEH1Q6PIU2 408 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 DPY19L3Q6ZPD9 716 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 MTSS1LQ765P7 747 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 SLC44A3Q8N4M1 653 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.26■□□□□ 0.51
ATG4B-217ENST00000475693 FCRL3Q96P31 734 aaPredicted RBP18.26■□□□□ 0.51
ATG4B-217ENST00000475693 NUDCD1Q96RS6 583 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 SLC17A6Q9P2U8 582 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 SLC25A13Q9UJS0 675 aa18.26■□□□□ 0.51
ATG4B-217ENST00000475693 SDR42E2A6NKP2 422 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 SMAPO00193 183 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 CDK18Q07002 472 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 PTPRCAPQ14761 206 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 SLC1A5Q15758 541 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms