RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 ATP2C2O75185 946 aa6.64□□□□□ -1.35
SMC5-203ENST00000475540 IFIT1P09914 478 aaKnown RBP6.64□□□□□ -1.35
SMC5-203ENST00000475540 FGF3P11487 239 aaPredicted RBP6.64□□□□□ -1.35
SMC5-203ENST00000475540 FCGR1AP12314 374 aa6.64□□□□□ -1.35
SMC5-203ENST00000475540 SLC2A4P14672 509 aa6.64□□□□□ -1.35
SMC5-203ENST00000475540 PTPN2P17706 415 aa6.64□□□□□ -1.35
SMC5-203ENST00000475540 C21orf33P30042 268 aaPredicted RBP6.64□□□□□ -1.35
SMC5-203ENST00000475540 CLCN5P51795 746 aa6.64□□□□□ -1.35
SMC5-203ENST00000475540 HDAC4P56524 1084 aa6.64□□□□□ -1.35
SMC5-203ENST00000475540 CES5AQ6NT32 575 aa6.64□□□□□ -1.35
SMC5-203ENST00000475540 MYRIPQ8NFW9 859 aa6.64□□□□□ -1.35
SMC5-203ENST00000475540 TXNDC15Q96J42 360 aa6.64□□□□□ -1.35
SMC5-203ENST00000475540 CTAGE1Q96RT6 745 aa6.64□□□□□ -1.35
SMC5-203ENST00000475540 CLK4Q9HAZ1 481 aaKnown RBP6.64□□□□□ -1.35
SMC5-203ENST00000475540 TMEM160Q9NX00 188 aa6.64□□□□□ -1.35
SMC5-203ENST00000475540 PEMTQ9UBM1 199 aa6.64□□□□□ -1.35
SMC5-203ENST00000475540 NDRG3Q9UGV2 375 aa6.64□□□□□ -1.35
SMC5-203ENST00000475540 AGO1Q9UL18 857 aaKnown RBP6.64□□□□□ -1.35
SMC5-203ENST00000475540 SLC45A1Q9Y2W3 748 aa6.64□□□□□ -1.35
SMC5-203ENST00000475540 TEX22C9J3V5 150 aa6.63□□□□□ -1.35
SMC5-203ENST00000475540 PCNAP12004 261 aa6.63□□□□□ -1.35
SMC5-203ENST00000475540 CNTFP26441 200 aa6.63□□□□□ -1.35
SMC5-203ENST00000475540 RPL3P39023 403 aaKnown RBP6.63□□□□□ -1.35
SMC5-203ENST00000475540 SEC61A1P61619 476 aaKnown RBP6.63□□□□□ -1.35
SMC5-203ENST00000475540 TLE2Q04725 743 aa6.63□□□□□ -1.35
SMC5-203ENST00000475540 TBC1D26Q86UD7 250 aa6.63□□□□□ -1.35
SMC5-203ENST00000475540 TRIB2Q92519 343 aa6.63□□□□□ -1.35
SMC5-203ENST00000475540 C6orf106Q9H6K1 298 aaPredicted RBP6.63□□□□□ -1.35
SMC5-203ENST00000475540 HSF4Q9ULV5 492 aa6.63□□□□□ -1.35
SMC5-203ENST00000475540 EME2A4GXA9 379 aaPredicted RBP6.62□□□□□ -1.35
SMC5-203ENST00000475540 MTA2O94776 668 aa6.62□□□□□ -1.35
SMC5-203ENST00000475540 RYKP34925 604 aa6.62□□□□□ -1.35
SMC5-203ENST00000475540 MXI1P50539 228 aa6.62□□□□□ -1.35
SMC5-203ENST00000475540 ART1P52961 327 aa6.62□□□□□ -1.35
SMC5-203ENST00000475540 CDH15P55291 814 aa6.62□□□□□ -1.35
SMC5-203ENST00000475540 KLHL24Q6TFL4 600 aa6.62□□□□□ -1.35
SMC5-203ENST00000475540 NEK10Q6ZWH5 1172 aa6.62□□□□□ -1.35
SMC5-203ENST00000475540 CREB3L2Q70SY1 520 aa6.62□□□□□ -1.35
SMC5-203ENST00000475540 FAM160B2Q86V87 743 aa6.62□□□□□ -1.35
SMC5-203ENST00000475540 SMAP1Q8IYB5 467 aaPredicted RBP6.62□□□□□ -1.35
SMC5-203ENST00000475540 TCP11L2Q8N4U5 519 aa6.62□□□□□ -1.35
SMC5-203ENST00000475540 TMED6Q8WW62 240 aa6.62□□□□□ -1.35
SMC5-203ENST00000475540 FAM84BQ96KN1 310 aaPredicted RBP6.62□□□□□ -1.35
SMC5-203ENST00000475540 GPR63Q9BZJ6 419 aa6.62□□□□□ -1.35
SMC5-203ENST00000475540 INTS2Q9H0H0 1204 aaKnown RBP6.62□□□□□ -1.35
SMC5-203ENST00000475540 LINC01553A4QN01 128 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 VNN2O95498 520 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 POLBP06746 335 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 SRD5A1P18405 259 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 ITGB8P26012 769 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 MAPK9P45984 424 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 TRAF3Q13114 568 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 TRPC3Q13507 836 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 TDGQ13569 410 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 ARHGEF6Q15052 776 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 NAA35Q5VZE5 725 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 SLC22A25Q6T423 547 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 TADA2BQ86TJ2 420 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 RBM23Q86U06 439 aaKnown RBP6.61□□□□□ -1.35
SMC5-203ENST00000475540 SFTPA2Q8IWL1 248 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 CCDC105Q8IYK2 499 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 USP13Q92995 863 aaPredicted RBP6.61□□□□□ -1.35
SMC5-203ENST00000475540 RTP4Q96DX8 246 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 ELP4Q96EB1 424 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 RRN3Q9NYV6 651 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 OR6C3Q9NZP0 311 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 PROCRQ9UNN8 238 aa6.61□□□□□ -1.35
SMC5-203ENST00000475540 DYTNA2CJ06 578 aa6.6□□□□□ -1.35
SMC5-203ENST00000475540 PLEKHD1A6NEE1 506 aa6.6□□□□□ -1.35
SMC5-203ENST00000475540 CBY3A6NI87 242 aa6.6□□□□□ -1.35
SMC5-203ENST00000475540 KLRF2D3W0D1 207 aa6.6□□□□□ -1.35
SMC5-203ENST00000475540 ZNF12P17014 697 aa6.6□□□□□ -1.35
SMC5-203ENST00000475540 CXCR3P49682 368 aa6.6□□□□□ -1.35
SMC5-203ENST00000475540 NR1H2P55055 460 aa6.6□□□□□ -1.35
SMC5-203ENST00000475540 VAMP2P63027 116 aa6.6□□□□□ -1.35
SMC5-203ENST00000475540 EFNB1P98172 346 aa6.6□□□□□ -1.35
SMC5-203ENST00000475540 SERTAD4-AS1Q5TG53 156 aa6.6□□□□□ -1.35
SMC5-203ENST00000475540 SMC5Q8IY18 1101 aa6.6□□□□□ -1.35
SMC5-203ENST00000475540 KIAA2013Q8IYS2 634 aa6.6□□□□□ -1.35
SMC5-203ENST00000475540 AADATQ8N5Z0 425 aa6.6□□□□□ -1.35
SMC5-203ENST00000475540 NEXN-AS1Q8NBZ9 246 aa6.6□□□□□ -1.35
SMC5-203ENST00000475540 C11orf65Q8NCR3 313 aa6.6□□□□□ -1.35
SMC5-203ENST00000475540 ZC3HAV1LQ96H79 300 aaKnown RBP6.6□□□□□ -1.35
SMC5-203ENST00000475540 MMTAG2Q9BU76 263 aaKnown RBP6.6□□□□□ -1.35
SMC5-203ENST00000475540 BEX4Q9NWD9 120 aaPredicted RBP6.6□□□□□ -1.35
SMC5-203ENST00000475540 OCIAD1Q9NX40 245 aa6.6□□□□□ -1.35
SMC5-203ENST00000475540 HCN3Q9P1Z3 774 aa6.6□□□□□ -1.35
SMC5-203ENST00000475540 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.6□□□□□ -1.35
SMC5-203ENST00000475540 IGLV5-52A0A0A0MRZ9 124 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 GAGE10A6NGK3 116 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 PRSS44E7EML9 344 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 RGS11O94810 467 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 URODP06132 367 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 PDLIM4P50479 330 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 ITGADQ13349 1161 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 VEPH1Q14D04 833 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 TAF11Q15544 211 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 IZUMO4Q1ZYL8 232 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 SOWAHAQ2M3V2 549 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 ZNF766Q5HY98 468 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms