RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 ZNF670Q9BS34 389 aa24.3■■□□□ 1.48
CPNE1-223ENST00000475146 ANP32EQ9BTT0 268 aa24.3■■□□□ 1.48
CPNE1-223ENST00000475146 SLC17A9Q9BYT1 436 aa24.3■■□□□ 1.48
CPNE1-223ENST00000475146 SUV39H2Q9H5I1 410 aa24.3■■□□□ 1.48
CPNE1-223ENST00000475146 INTUQ9ULD6 942 aa24.3■■□□□ 1.48
CPNE1-223ENST00000475146 TRPM6Q9BX84 2022 aa24.29■■□□□ 1.48
CPNE1-223ENST00000475146 SPINT1O43278 529 aa24.29■■□□□ 1.48
CPNE1-223ENST00000475146 MTA2O94776 668 aa24.29■■□□□ 1.48
CPNE1-223ENST00000475146 ARHGAP25P42331 645 aa24.29■■□□□ 1.48
CPNE1-223ENST00000475146 CLDN2P57739 230 aa24.29■■□□□ 1.48
CPNE1-223ENST00000475146 SGCGQ13326 291 aa24.29■■□□□ 1.48
CPNE1-223ENST00000475146 ZNF235Q14590 738 aa24.29■■□□□ 1.48
CPNE1-223ENST00000475146 PAF1Q8N7H5 531 aa24.29■■□□□ 1.48
CPNE1-223ENST00000475146 NSMCE1Q8WV22 266 aa24.29■■□□□ 1.48
CPNE1-223ENST00000475146 TUBGCP5Q96RT8 1024 aa24.29■■□□□ 1.48
CPNE1-223ENST00000475146 ATP13A3Q9H7F0 1226 aa24.29■■□□□ 1.48
CPNE1-223ENST00000475146 IGLON5A6NGN9 336 aa24.28■■□□□ 1.48
CPNE1-223ENST00000475146 AREL1O15033 823 aa24.28■■□□□ 1.48
CPNE1-223ENST00000475146 MFSD11O43934 449 aa24.28■■□□□ 1.48
CPNE1-223ENST00000475146 PAK4O96013 591 aaPredicted RBP24.28■■□□□ 1.48
CPNE1-223ENST00000475146 TIMP2P16035 220 aa24.28■■□□□ 1.48
CPNE1-223ENST00000475146 PMLP29590 882 aa24.28■■□□□ 1.48
CPNE1-223ENST00000475146 MAGEA1P43355 309 aa24.28■■□□□ 1.48
CPNE1-223ENST00000475146 CSNK1DP48730 415 aa24.28■■□□□ 1.48
CPNE1-223ENST00000475146 ARRB1P49407 418 aaPredicted RBP24.28■■□□□ 1.48
CPNE1-223ENST00000475146 RENBPP51606 427 aa24.28■■□□□ 1.48
CPNE1-223ENST00000475146 FAM193AP78312 1265 aa24.28■■□□□ 1.48
CPNE1-223ENST00000475146 SLC10A7Q0GE19 358 aa24.28■■□□□ 1.48
CPNE1-223ENST00000475146 FGL2Q14314 439 aa24.28■■□□□ 1.48
CPNE1-223ENST00000475146 TRIP6Q15654 476 aaKnown RBP24.28■■□□□ 1.48
CPNE1-223ENST00000475146 ANKRD20A8PQ5CZ79 823 aa24.28■■□□□ 1.48
CPNE1-223ENST00000475146 SPATS2Q86XZ4 545 aaKnown RBP24.28■■□□□ 1.48
CPNE1-223ENST00000475146 CAMK1DQ8IU85 385 aa24.28■■□□□ 1.48
CPNE1-223ENST00000475146 PCDH19Q8TAB3 1148 aa24.28■■□□□ 1.48
CPNE1-223ENST00000475146 RHBDD1Q8TEB9 315 aa24.28■■□□□ 1.48
CPNE1-223ENST00000475146 ZNF641Q96N77 438 aaPredicted RBP24.28■■□□□ 1.48
CPNE1-223ENST00000475146 PSKH2Q96QS6 385 aa24.28■■□□□ 1.48
CPNE1-223ENST00000475146 PCOLCE2Q9UKZ9 415 aa24.28■■□□□ 1.48
CPNE1-223ENST00000475146 MUSKO15146 869 aa24.27■■□□□ 1.48
CPNE1-223ENST00000475146 PCDHGA12O60330 932 aa24.27■■□□□ 1.48
CPNE1-223ENST00000475146 BUB1BO60566 1050 aaPredicted RBP24.27■■□□□ 1.48
CPNE1-223ENST00000475146 MAFKO60675 156 aa24.27■■□□□ 1.48
CPNE1-223ENST00000475146 THEGLP0DJG4 465 aa24.27■■□□□ 1.48
CPNE1-223ENST00000475146 SERPINA4P29622 427 aa24.27■■□□□ 1.48
CPNE1-223ENST00000475146 SCNN1BP51168 640 aa24.27■■□□□ 1.48
CPNE1-223ENST00000475146 FOXC1Q12948 553 aa24.27■■□□□ 1.48
CPNE1-223ENST00000475146 INAVAQ3KP66 663 aa24.27■■□□□ 1.48
CPNE1-223ENST00000475146 NCBP2-AS2Q69YL0 99 aa24.27■■□□□ 1.48
CPNE1-223ENST00000475146 GCNT7Q6ZNI0 430 aa24.27■■□□□ 1.48
CPNE1-223ENST00000475146 PTAR1Q7Z6K3 402 aaPredicted RBP24.27■■□□□ 1.48
CPNE1-223ENST00000475146 BBS5Q8N3I7 341 aa24.27■■□□□ 1.48
CPNE1-223ENST00000475146 OXR1Q8N573 874 aa24.27■■□□□ 1.48
CPNE1-223ENST00000475146 CXorf40AQ8TE69 158 aa24.27■■□□□ 1.48
CPNE1-223ENST00000475146 BTBD3Q9Y2F9 522 aa24.27■■□□□ 1.48
CPNE1-223ENST00000475146 PCNX2A6NKB5 2137 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 TSPAN11A1L157 253 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 LRRD1A4D1F6 860 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 A6NNZ2 444 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 YKT6O15498 198 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 ITIH2P19823 946 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 CYLC1P35663 651 aaPredicted RBP24.26■■□□□ 1.47
CPNE1-223ENST00000475146 GRK6P43250 576 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 SUOXP51687 545 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 BCL2L1Q07817 233 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 NSUN2Q08J23 767 aaKnown RBP eCLIP24.26■■□□□ 1.47
CPNE1-223ENST00000475146 SPA17Q15506 151 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 BRAT1Q6PJG6 821 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 DBX2Q6ZNG2 339 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 GATAD2AQ86YP4 633 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 CCDC170Q8IYT3 715 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 OR13H1Q8NG92 308 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 HCAR2Q8TDS4 363 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 RAPGEF5Q92565 580 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 PANX2Q96RD6 677 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 WRAP53Q9BUR4 548 aaKnown RBP24.26■■□□□ 1.47
CPNE1-223ENST00000475146 C1QTNF2Q9BXJ5 285 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 ERVMER34-1Q9H9K5 563 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 CABIN1Q9Y6J0 2220 aa24.26■■□□□ 1.47
CPNE1-223ENST00000475146 RAD51BO15315 384 aa24.25■■□□□ 1.47
CPNE1-223ENST00000475146 MMP20O60882 483 aa24.25■■□□□ 1.47
CPNE1-223ENST00000475146 CBFA2T3O75081 653 aa24.25■■□□□ 1.47
CPNE1-223ENST00000475146 MAP3K6O95382 1288 aa24.25■■□□□ 1.47
CPNE1-223ENST00000475146 PEX11BO96011 259 aa24.25■■□□□ 1.47
CPNE1-223ENST00000475146 ITGAVP06756 1048 aa24.25■■□□□ 1.47
CPNE1-223ENST00000475146 KDELR1P24390 212 aa24.25■■□□□ 1.47
CPNE1-223ENST00000475146 HSPA9P38646 679 aaKnown RBP24.25■■□□□ 1.47
CPNE1-223ENST00000475146 NOP2P46087 812 aaKnown RBP24.25■■□□□ 1.47
CPNE1-223ENST00000475146 AP1S1P61966 158 aa24.25■■□□□ 1.47
CPNE1-223ENST00000475146 ELP6Q0PNE2 266 aa24.25■■□□□ 1.47
CPNE1-223ENST00000475146 PAFAH1B3Q15102 231 aaKnown RBP24.25■■□□□ 1.47
CPNE1-223ENST00000475146 SHBQ15464 509 aa24.25■■□□□ 1.47
CPNE1-223ENST00000475146 UGP2Q16851 508 aa24.25■■□□□ 1.47
CPNE1-223ENST00000475146 FAF2Q96CS3 445 aa24.25■■□□□ 1.47
CPNE1-223ENST00000475146 PCDH12Q9NPG4 1184 aa24.25■■□□□ 1.47
CPNE1-223ENST00000475146 LUC7LQ9NQ29 371 aaKnown RBP24.25■■□□□ 1.47
CPNE1-223ENST00000475146 ANGPTL2Q9UKU9 493 aa24.25■■□□□ 1.47
CPNE1-223ENST00000475146 KRT1P04264 644 aa24.24■■□□□ 1.47
CPNE1-223ENST00000475146 TNNT1P13805 278 aa24.24■■□□□ 1.47
CPNE1-223ENST00000475146 EPHA8P29322 1005 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-223ENST00000475146 GARSP41250 739 aaKnown RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms