RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 CACNA1EQ15878 2313 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 LRRD1A4D1F6 860 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 SOWAHDA6NJG2 315 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 RAD51BO15315 384 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 AP1G1O43747 822 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 MAFKO60675 156 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 MMP20O60882 483 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 THEGLP0DJG4 465 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 HNRNPA2B1P22626 353 aaKnown RBP16.18■□□□□ 0.18
ITGB1-210ENST00000474568 NOP2P46087 812 aaKnown RBP16.18■□□□□ 0.18
ITGB1-210ENST00000474568 SCNN1BP51168 640 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 FOXC1Q12948 553 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 SGCGQ13326 291 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 ANKRD20A8PQ5CZ79 823 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 KIAA1161Q6NSJ0 714 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 GCNT7Q6ZNI0 430 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 ZSWIM9Q86XI8 627 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 FAM71BQ8TC56 605 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 RAB7BQ96AH8 199 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 KLHDC7BQ96G42 594 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 CPEB1Q9BZB8 566 aaKnown RBP16.18■□□□□ 0.18
ITGB1-210ENST00000474568 SUV39H2Q9H5I1 410 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 CAAP1Q9H8G2 361 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 RCOR3Q9P2K3 495 aaPredicted RBP16.18■□□□□ 0.18
ITGB1-210ENST00000474568 SEPT3Q9UH03 358 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 LCMT1Q9UIC8 334 aa16.18■□□□□ 0.18
ITGB1-210ENST00000474568 A0A1B0GTQ1 180 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 TSPAN6O43657 245 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 MTA2O94776 668 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 TOP3BO95985 862 aaKnown RBP16.17■□□□□ 0.18
ITGB1-210ENST00000474568 PEX11BO96011 259 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 KRT1P04264 644 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 ZNF883P0CG24 379 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 KDELR1P24390 212 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 MAXP61244 160 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 RFTN1Q14699 578 aaPredicted RBP16.17■□□□□ 0.18
ITGB1-210ENST00000474568 SUZ12Q15022 739 aaKnown RBP16.17■□□□□ 0.18
ITGB1-210ENST00000474568 PDK2Q15119 407 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 SHBQ15464 509 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 PTAR1Q7Z6K3 402 aaPredicted RBP16.17■□□□□ 0.18
ITGB1-210ENST00000474568 MAP7D3Q8IWC1 876 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 TMEM145Q8NBT3 493 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 OR13H1Q8NG92 308 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 CXorf40AQ8TE69 158 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 RHBDD1Q8TEB9 315 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 NSMCE1Q8WV22 266 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 NSMCE3Q96MG7 304 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 ZNF670Q9BS34 389 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 GOLPH3Q9H4A6 298 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 ATP13A3Q9H7F0 1226 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 DKK3Q9UBP4 350 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 PCOLCE2Q9UKZ9 415 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 INTUQ9ULD6 942 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 PCDHA13Q9Y5I0 950 aa16.17■□□□□ 0.18
ITGB1-210ENST00000474568 KNL1Q8NG31 2342 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 GOLGA8CPA6NN73 597 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 AREL1O15033 823 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 SPOPO43791 374 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 SDC3O75056 442 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 SPINK2P20155 84 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 COMTP21964 271 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 SERPINA4P29622 427 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 CYLC1P35663 651 aaPredicted RBP16.16■□□□□ 0.18
ITGB1-210ENST00000474568 ARHGAP25P42331 645 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 CSNK1DP48730 415 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 GBE1Q04446 702 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 BCL2L1Q07817 233 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 BNIP3Q12983 259 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 SPA17Q15506 151 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 TRIP6Q15654 476 aaKnown RBP16.16■□□□□ 0.18
ITGB1-210ENST00000474568 PGBD5Q8N414 524 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.16■□□□□ 0.18
ITGB1-210ENST00000474568 PQLC3Q8N755 202 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 SPC24Q8NBT2 197 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 RNF25Q96BH1 459 aaPredicted RBP16.16■□□□□ 0.18
ITGB1-210ENST00000474568 ZNF599Q96NL3 588 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 PSKH2Q96QS6 385 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 PANX2Q96RD6 677 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 NT5MQ9NPB1 228 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 PCDH12Q9NPG4 1184 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 COQ6Q9Y2Z9 468 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 PCDHGB2Q9Y5G2 931 aa16.16■□□□□ 0.18
ITGB1-210ENST00000474568 POM121BA6NF01 834 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 FLRT2O43155 660 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 MAGEC1O60732 1142 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 ITGAVP06756 1048 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 PMLP29590 882 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 MMP13P45452 471 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 RENBPP51606 427 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 GRM3Q14832 879 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 PAFAH1B3Q15102 231 aaKnown RBP16.15■□□□□ 0.18
ITGB1-210ENST00000474568 UGP2Q16851 508 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 ZNF542PQ5EBM4 170 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 FAM182AQ5T1J6 154 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 Q6ZSR6 202 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 IQCHQ86VS3 1027 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 CCDC170Q8IYT3 715 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 BBS5Q8N3I7 341 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 PNPLA1Q8N8W4 532 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 PDCD6IPQ8WUM4 868 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms