RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 CKAP5Q14008 2032 aa4.33□□□□□ -1.72
SSB-210ENST00000474273 DYTNA2CJ06 578 aa4.33□□□□□ -1.72
SSB-210ENST00000474273 SMTNL1A8MU46 457 aa4.33□□□□□ -1.72
SSB-210ENST00000474273 CHRM4P08173 479 aa4.33□□□□□ -1.72
SSB-210ENST00000474273 PAPOLAP51003 745 aaKnown RBP4.33□□□□□ -1.72
SSB-210ENST00000474273 POU3F1Q03052 451 aaPredicted RBP4.33□□□□□ -1.72
SSB-210ENST00000474273 GRSF1Q12849 480 aaKnown RBP eCLIP4.33□□□□□ -1.72
SSB-210ENST00000474273 COASYQ13057 564 aa4.33□□□□□ -1.72
SSB-210ENST00000474273 MRGPRG-AS1Q2M3A8 158 aa4.33□□□□□ -1.72
SSB-210ENST00000474273 FAM76BQ5HYJ3 339 aa4.33□□□□□ -1.72
SSB-210ENST00000474273 MON1AQ86VX9 555 aa4.33□□□□□ -1.72
SSB-210ENST00000474273 C2CD5Q86YS7 1000 aa4.33□□□□□ -1.72
SSB-210ENST00000474273 DENND6AQ8IWF6 608 aa4.33□□□□□ -1.72
SSB-210ENST00000474273 SUGP1Q8IWZ8 645 aaKnown RBP4.33□□□□□ -1.72
SSB-210ENST00000474273 USP38Q8NB14 1042 aa4.33□□□□□ -1.72
SSB-210ENST00000474273 TMEM170AQ8WVE7 144 aa4.33□□□□□ -1.72
SSB-210ENST00000474273 HES6Q96HZ4 224 aa4.33□□□□□ -1.72
SSB-210ENST00000474273 YME1L1Q96TA2 773 aa4.33□□□□□ -1.72
SSB-210ENST00000474273 ARPC5LQ9BPX5 153 aa4.33□□□□□ -1.72
SSB-210ENST00000474273 STN1Q9H668 368 aaKnown RBP4.33□□□□□ -1.72
SSB-210ENST00000474273 DDX31Q9H8H2 851 aaKnown RBP4.33□□□□□ -1.72
SSB-210ENST00000474273 SPATS2LQ9NUQ6 558 aaKnown RBP4.33□□□□□ -1.72
SSB-210ENST00000474273 PAM16Q9Y3D7 125 aa4.33□□□□□ -1.72
SSB-210ENST00000474273 PLSCR5A0PG75 271 aa4.32□□□□□ -1.72
SSB-210ENST00000474273 PEX12O00623 359 aa4.32□□□□□ -1.72
SSB-210ENST00000474273 TCEA3O75764 348 aa4.32□□□□□ -1.72
SSB-210ENST00000474273 VNN2O95498 520 aa4.32□□□□□ -1.72
SSB-210ENST00000474273 CNPP09543 421 aaKnown RBP4.32□□□□□ -1.72
SSB-210ENST00000474273 TFPIP10646 304 aa4.32□□□□□ -1.72
SSB-210ENST00000474273 DAOP14920 347 aa4.32□□□□□ -1.72
SSB-210ENST00000474273 TTKP33981 857 aa4.32□□□□□ -1.72
SSB-210ENST00000474273 RPL3P39023 403 aaKnown RBP4.32□□□□□ -1.72
SSB-210ENST00000474273 PEX5P50542 639 aa4.32□□□□□ -1.72
SSB-210ENST00000474273 EEF1A2Q05639 463 aaKnown RBP4.32□□□□□ -1.72
SSB-210ENST00000474273 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.32□□□□□ -1.72
SSB-210ENST00000474273 NEK10Q6ZWH5 1172 aa4.32□□□□□ -1.72
SSB-210ENST00000474273 MB21D2Q8IYB1 491 aaPredicted RBP4.32□□□□□ -1.72
SSB-210ENST00000474273 GDPD5Q8WTR4 605 aa4.32□□□□□ -1.72
SSB-210ENST00000474273 TRIB2Q92519 343 aa4.32□□□□□ -1.72
SSB-210ENST00000474273 CNOT9Q92600 299 aaKnown RBP4.32□□□□□ -1.72
SSB-210ENST00000474273 CD180Q99467 661 aa4.32□□□□□ -1.72
SSB-210ENST00000474273 PTPRHQ9HD43 1115 aa4.32□□□□□ -1.72
SSB-210ENST00000474273 ITM2CQ9NQX7 267 aa4.32□□□□□ -1.72
SSB-210ENST00000474273 ANKRD10Q9NXR5 420 aa4.32□□□□□ -1.72
SSB-210ENST00000474273 A0A0B4J293 547 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 LOC102724159A0A0B4J2E5 919 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 A0A0U1RQJ8 604 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 TYW5A2RUC4 315 aaKnown RBP4.31□□□□□ -1.72
SSB-210ENST00000474273 VWA3AA6NCI4 1184 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 SH2D7A6NKC9 451 aaPredicted RBP4.31□□□□□ -1.72
SSB-210ENST00000474273 SRRM3A6NNA2 597 aaPredicted RBP4.31□□□□□ -1.72
SSB-210ENST00000474273 SLC16A5O15375 505 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 KLK10O43240 276 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 NBNO60934 754 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 CH25HO95992 272 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 TBL3Q12788 808 aaKnown RBP4.31□□□□□ -1.72
SSB-210ENST00000474273 PWP2Q15269 919 aaKnown RBP4.31□□□□□ -1.72
SSB-210ENST00000474273 SF3B4Q15427 424 aaKnown RBP eCLIP4.31□□□□□ -1.723e-7■■■■□ 19.4
SSB-210ENST00000474273 EDRF1Q3B7T1 1238 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 FBXO47Q5MNV8 452 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 RETSATQ6NUM9 610 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 KLHL24Q6TFL4 600 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 CPXM2Q8N436 756 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 NKAPQ8N5F7 415 aaKnown RBP4.31□□□□□ -1.72
SSB-210ENST00000474273 RAB40AQ8WXH6 277 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 STAMQ92783 540 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 WBP2Q969T9 261 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 IGSF21Q96ID5 467 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 CLSTN3Q9BQT9 956 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.31□□□□□ -1.72
SSB-210ENST00000474273 TAOK3Q9H2K8 898 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 RETREG1Q9H6L5 497 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 ALKBH4Q9NXW9 302 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 OR6C3Q9NZP0 311 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 PCDHGB5Q9Y5G0 923 aa4.31□□□□□ -1.72
SSB-210ENST00000474273 IGLV5-37A0A075B6J1 123 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 C17orf113A0A1B0GUU1 675 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.3□□□□□ -1.72
SSB-210ENST00000474273 ARHGAP10A1A4S6 786 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 FAM90A7PA6NKC0 464 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 FAM90A22PA8MWA6 464 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 FAM90A12PA8MX19 464 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 FAM90A23PA8MXZ1 464 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 EBAG9O00559 213 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 CEP104O60308 925 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 TSPAN3O60637 253 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 FMO4P31512 558 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 EFR3AQ14156 821 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 NAA25Q14CX7 972 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 XKR9Q5GH70 373 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 LURAP1LQ8IV03 231 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 AADATQ8N5Z0 425 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 LILRB1Q8NHL6 650 aaPredicted RBP4.3□□□□□ -1.72
SSB-210ENST00000474273 TRIM63Q969Q1 353 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 OTULINQ96BN8 352 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 LRFN5Q96NI6 719 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 LMAN2LQ9H0V9 348 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 NDRG3Q9UGV2 375 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 NFS1Q9Y697 457 aa4.3□□□□□ -1.72
SSB-210ENST00000474273 ADGRF5Q8IZF2 1346 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms