RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 BOCQ9BWV1 1114 aa20.54■□□□□ 0.88
APP-215ENST00000474136 FADS3Q9Y5Q0 445 aa20.54■□□□□ 0.88
APP-215ENST00000474136 SNX10Q9Y5X0 201 aa20.54■□□□□ 0.88
APP-215ENST00000474136 AHCTF1Q8WYP5 2266 aa20.54■□□□□ 0.88
APP-215ENST00000474136 TPP1O14773 563 aa20.53■□□□□ 0.88
APP-215ENST00000474136 ITGA2BP08514 1039 aa20.53■□□□□ 0.88
APP-215ENST00000474136 SKILP12757 684 aa20.53■□□□□ 0.88
APP-215ENST00000474136 ADRB3P13945 408 aa20.53■□□□□ 0.88
APP-215ENST00000474136 CYLC1P35663 651 aaPredicted RBP20.53■□□□□ 0.88
APP-215ENST00000474136 C5orf22Q49AR2 442 aa20.53■□□□□ 0.88
APP-215ENST00000474136 KIAA1161Q6NSJ0 714 aa20.53■□□□□ 0.88
APP-215ENST00000474136 LURAP1LQ8IV03 231 aa20.53■□□□□ 0.88
APP-215ENST00000474136 ZNF606Q8WXB4 792 aa20.53■□□□□ 0.88
APP-215ENST00000474136 FEM1CQ96JP0 617 aa20.53■□□□□ 0.88
APP-215ENST00000474136 CCDC3Q9BQI4 270 aa20.53■□□□□ 0.88
APP-215ENST00000474136 DEF6Q9H4E7 631 aa20.53■□□□□ 0.88
APP-215ENST00000474136 ANLNQ9NQW6 1124 aa20.53■□□□□ 0.88
APP-215ENST00000474136 PNMA8BQ9ULN7 279 aaPredicted RBP20.53■□□□□ 0.88
APP-215ENST00000474136 MED7O43513 233 aa20.53■□□□□ 0.88
APP-215ENST00000474136 ZNF821O75541 412 aaPredicted RBP20.53■□□□□ 0.88
APP-215ENST00000474136 IPO7O95373 1038 aaKnown RBP20.53■□□□□ 0.88
APP-215ENST00000474136 ITGB6P18564 788 aa20.53■□□□□ 0.88
APP-215ENST00000474136 SLC5A2P31639 672 aa20.53■□□□□ 0.88
APP-215ENST00000474136 CLCN1P35523 988 aa20.53■□□□□ 0.88
APP-215ENST00000474136 MLLT3P42568 568 aaPredicted RBP20.53■□□□□ 0.88
APP-215ENST00000474136 SPIDRQ14159 915 aa20.53■□□□□ 0.88
APP-215ENST00000474136 HGSNATQ68CP4 663 aa20.53■□□□□ 0.88
APP-215ENST00000474136 USP53Q70EK8 1073 aa20.53■□□□□ 0.88
APP-215ENST00000474136 B3GNT8Q7Z7M8 397 aa20.53■□□□□ 0.88
APP-215ENST00000474136 PPP1R16AQ96I34 528 aa20.53■□□□□ 0.88
APP-215ENST00000474136 CPXM1Q96SM3 734 aa20.53■□□□□ 0.88
APP-215ENST00000474136 HAUS4Q9H6D7 363 aa20.53■□□□□ 0.88
APP-215ENST00000474136 NHEJ1Q9H9Q4 299 aaPredicted RBP20.53■□□□□ 0.88
APP-215ENST00000474136 STARD5Q9NSY2 213 aa20.53■□□□□ 0.88
APP-215ENST00000474136 UBR5O95071 2799 aaPredicted RBP20.52■□□□□ 0.88
APP-215ENST00000474136 IGLON5A6NGN9 336 aa20.52■□□□□ 0.87
APP-215ENST00000474136 FPGTO14772 594 aa20.52■□□□□ 0.87
APP-215ENST00000474136 THAP12O43422 761 aa20.52■□□□□ 0.87
APP-215ENST00000474136 NOBOXO60393 691 aa20.52■□□□□ 0.87
APP-215ENST00000474136 CYP11B1P15538 503 aa20.52■□□□□ 0.87
APP-215ENST00000474136 RECQLP46063 649 aaPredicted RBP20.52■□□□□ 0.87
APP-215ENST00000474136 CLCN6P51797 869 aa20.52■□□□□ 0.87
APP-215ENST00000474136 PFN3P60673 137 aa20.52■□□□□ 0.87
APP-215ENST00000474136 PRRT3Q5FWE3 981 aa20.52■□□□□ 0.87
APP-215ENST00000474136 PARS2Q7L3T8 475 aaKnown RBP20.52■□□□□ 0.87
APP-215ENST00000474136 WDTC1Q8N5D0 677 aa20.52■□□□□ 0.87
APP-215ENST00000474136 DCAF4L2Q8NA75 395 aa20.52■□□□□ 0.87
APP-215ENST00000474136 OR7D4Q8NG98 312 aa20.52■□□□□ 0.87
APP-215ENST00000474136 PPP1R13BQ96KQ4 1090 aa20.52■□□□□ 0.87
APP-215ENST00000474136 C1QTNF2Q9BXJ5 285 aa20.52■□□□□ 0.87
APP-215ENST00000474136 LUC7LQ9NQ29 371 aaKnown RBP20.52■□□□□ 0.87
APP-215ENST00000474136 SPASTQ9UBP0 616 aa20.52■□□□□ 0.87
APP-215ENST00000474136 APOBEC3BQ9UH17 382 aaKnown RBP20.52■□□□□ 0.87
APP-215ENST00000474136 GGT7Q9UJ14 662 aa20.52■□□□□ 0.87
APP-215ENST00000474136 I6L893 689 aaPredicted RBP20.51■□□□□ 0.87
APP-215ENST00000474136 NTN3O00634 580 aaPredicted RBP20.51■□□□□ 0.87
APP-215ENST00000474136 PLD2O14939 933 aa20.51■□□□□ 0.87
APP-215ENST00000474136 GJB6O95452 261 aa20.51■□□□□ 0.87
APP-215ENST00000474136 FAM87AP0C7U9 286 aa20.51■□□□□ 0.87
APP-215ENST00000474136 TNFAIP3P21580 790 aa20.51■□□□□ 0.87
APP-215ENST00000474136 ITGB7P26010 798 aa20.51■□□□□ 0.87
APP-215ENST00000474136 GNA15P30679 374 aa20.51■□□□□ 0.87
APP-215ENST00000474136 RPIAP49247 311 aa20.51■□□□□ 0.87
APP-215ENST00000474136 CCZ1BP86790 482 aa20.51■□□□□ 0.87
APP-215ENST00000474136 CCZ1P86791 482 aaPredicted RBP20.51■□□□□ 0.87
APP-215ENST00000474136 SGCGQ13326 291 aa20.51■□□□□ 0.87
APP-215ENST00000474136 OTUD1Q5VV17 481 aaPredicted RBP20.51■□□□□ 0.87
APP-215ENST00000474136 PPP1R2P3Q6NXS1 205 aa20.51■□□□□ 0.87
APP-215ENST00000474136 ATG14Q6ZNE5 492 aa20.51■□□□□ 0.87
APP-215ENST00000474136 TFAP2DQ7Z6R9 452 aa20.51■□□□□ 0.87
APP-215ENST00000474136 JAMLQ86YT9 394 aa20.51■□□□□ 0.87
APP-215ENST00000474136 TMEM139Q8IV31 216 aa20.51■□□□□ 0.87
APP-215ENST00000474136 ZNF683Q8IZ20 524 aa20.51■□□□□ 0.87
APP-215ENST00000474136 EPS8L1Q8TE68 723 aa20.51■□□□□ 0.87
APP-215ENST00000474136 NAT6Q93015 286 aa20.51■□□□□ 0.87
APP-215ENST00000474136 SGF29Q96ES7 293 aa20.51■□□□□ 0.87
APP-215ENST00000474136 LIN37Q96GY3 246 aaPredicted RBP20.51■□□□□ 0.87
APP-215ENST00000474136 CHP1Q99653 195 aa20.51■□□□□ 0.87
APP-215ENST00000474136 ARHGAP9Q9BRR9 750 aa20.51■□□□□ 0.87
APP-215ENST00000474136 LRRC61Q9BV99 259 aa20.51■□□□□ 0.87
APP-215ENST00000474136 EPB41L5Q9HCM4 733 aa20.51■□□□□ 0.87
APP-215ENST00000474136 MPP6Q9NZW5 540 aa20.51■□□□□ 0.87
APP-215ENST00000474136 RABGEF1Q9UJ41 708 aa20.51■□□□□ 0.87
APP-215ENST00000474136 PADI4Q9UM07 663 aa20.51■□□□□ 0.87
APP-215ENST00000474136 ITM2BQ9Y287 266 aa20.51■□□□□ 0.87
APP-215ENST00000474136 RIOK3O14730 519 aaKnown RBP20.5■□□□□ 0.87
APP-215ENST00000474136 AKR1B10O60218 316 aa20.5■□□□□ 0.87
APP-215ENST00000474136 HSF2BPO75031 334 aa20.5■□□□□ 0.87
APP-215ENST00000474136 GLI1P08151 1106 aa20.5■□□□□ 0.87
APP-215ENST00000474136 CELA2BP08218 269 aaPredicted RBP20.5■□□□□ 0.87
APP-215ENST00000474136 PNMA6AP0CW24 399 aaPredicted RBP20.5■□□□□ 0.87
APP-215ENST00000474136 HGFP14210 728 aa20.5■□□□□ 0.87
APP-215ENST00000474136 L1CAMP32004 1257 aa20.5■□□□□ 0.87
APP-215ENST00000474136 UGT1A5P35504 534 aa20.5■□□□□ 0.87
APP-215ENST00000474136 EIF4A3P38919 411 aaKnown RBP20.5■□□□□ 0.87
APP-215ENST00000474136 ABL2P42684 1182 aa20.5■□□□□ 0.87
APP-215ENST00000474136 DNA2P51530 1060 aa20.5■□□□□ 0.87
APP-215ENST00000474136 CDR2Q01850 454 aa20.5■□□□□ 0.87
APP-215ENST00000474136 EFHC1Q5JVL4 640 aa20.5■□□□□ 0.87
APP-215ENST00000474136 E4F1Q66K89 784 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms