RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 PPANQ9NQ55 473 aaKnown RBP10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 TRPV5Q9NQA5 729 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 TXNDC16Q9P2K2 825 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 PRKAG3Q9UGI9 489 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 SUN2Q9UH99 717 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 EVLQ9UI08 416 aaPredicted RBP10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 FBXL21Q9UKT6 434 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 RAI2Q9Y5P3 530 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 ACTL7AQ9Y615 435 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 ANKRD36A6QL64 1941 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 HEATR9A2RTY3 570 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 C1QTNF3-AMACRE9PGA6 284 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 MAN2B1O00754 1011 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 TRIM24O15164 1050 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 ATP8B1O43520 1251 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 SMAD6O43541 496 aaKnown RBP10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 CRTAMO95727 393 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 AGTP01019 485 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 EPOP01588 193 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 PRNPP04156 253 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 EPHX1P07099 455 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 ASGR2P07307 311 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 GSTA2P09210 222 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 MYZAPP0CAP1 466 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 SRFP11831 508 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 TSHRP16473 764 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 DRD1P21728 446 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 CTHP32929 405 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 OPRD1P41143 372 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 ELK3P41970 407 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 TNFRSF4P43489 277 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 GRIA4P48058 902 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 SOX9P48436 509 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 CCNHP51946 323 aaPredicted RBP10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 SEC13P55735 322 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 PDE1BQ01064 536 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 NIPAL4Q0D2K0 466 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 GALNT3Q14435 633 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 SLC1A5Q15758 541 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 MYLK3Q32MK0 819 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 FNBP1LQ5T0N5 605 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 FAM182AQ5T1J6 154 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 ARMC3Q5W041 872 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 ALS2CLQ60I27 953 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 KCTD11Q693B1 232 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 NCEH1Q6PIU2 408 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 USP45Q70EL2 814 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 NLRP9Q7RTR0 991 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 ZNF513Q8N8E2 541 aaPredicted RBP10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 OR6K2Q8NGY2 324 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 ARRDC2Q8TBH0 407 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 GRIN3AQ8TCU5 1115 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 BLOC1S5Q8TDH9 187 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 PTCD2Q8WV60 388 aaKnown RBP10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 SORCS1Q8WY21 1168 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 LRIG1Q96JA1 1093 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 LMLNQ96KR4 655 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 MRGPRX2Q96LB1 330 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 EBNA1BP2Q99848 306 aaKnown RBP10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 HEPHQ9BQS7 1158 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 TDRD1Q9BXT4 1180 aaKnown RBP10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 CASS4Q9NQ75 786 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 HEBP1Q9NRV9 189 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 PIH1D1Q9NWS0 290 aaKnown RBP10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 HACD3Q9P035 362 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 IL36AQ9UHA7 158 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 CHKBQ9Y259 395 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 MRPS17Q9Y2R5 130 aaKnown RBP10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 FAM169AQ9Y6X4 670 aa10.37□□□□□ -0.75
PRPF38A-202ENST00000474048 EXOC1LA0A1B0GW35 172 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 TTC24A2A3L6 582 aaPredicted RBP10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 OTOL1A6NHN0 477 aaPredicted RBP10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 C2orf81A6NN90 581 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 TTC34A8MYJ7 566 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 E7ESA3 106 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 MUSKO15146 869 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 ALOX15BO15296 676 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 RIPK2O43353 540 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 OPA1O60313 960 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 AVILO75366 819 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 SLC4A1P02730 911 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 ALADP13716 330 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 IL9P15248 144 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 HSD17B3P37058 310 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 RGRP47804 291 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 RPL26P61254 145 aaKnown RBP10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 CCDC15Q0P6D6 951 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 ZNF234Q14588 700 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 POU6F1Q14863 301 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 PON2Q15165 354 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 KYNUQ16719 465 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 KLHL38Q2WGJ6 581 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 PCID2Q5JVF3 399 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 SIRPB2Q5JXA9 342 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 SPANXN3Q5MJ09 141 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 KDELC1Q6UW63 502 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 GDPD4Q6W3E5 623 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 TPRG1Q6ZUI0 275 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 TAOK1Q7L7X3 1001 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms