RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 LZTFL1Q9NQ48 299 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 AASDHPPTQ9NRN7 309 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 RBM22Q9NW64 420 aaKnown RBP eCLIP13.91□□□□□ -0.18
USF1-205ENST00000473969 DKK3Q9UBP4 350 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 AMACRQ9UHK6 382 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 TTLL3Q9Y4R7 772 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 GPR179Q6PRD1 2367 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 CHD5Q8TDI0 1954 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 NUP205Q92621 2012 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 hCG_1818297A0A087WSY0 165 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.9□□□□□ -0.18
USF1-205ENST00000473969 A0A1W2PQ67 120 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 A0A1W2PQU0 124 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 PATE3B3GLJ2 98 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 TSPAN6O43657 245 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 AP1G1O43747 822 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 FTCDO95954 541 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 IGHV4-34P06331 123 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 TGM1P22735 817 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 CES1P23141 567 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 RGRP47804 291 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 MARCKSL1P49006 195 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 C21orf59P57076 290 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 RPS21P63220 83 aaKnown RBP13.9□□□□□ -0.18
USF1-205ENST00000473969 IRX4P78413 519 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 CCZ1BP86790 482 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 CCZ1P86791 482 aaPredicted RBP13.9□□□□□ -0.18
USF1-205ENST00000473969 ELP6Q0PNE2 266 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 SLC10A2Q12908 348 aaPredicted RBP13.9□□□□□ -0.18
USF1-205ENST00000473969 SGCGQ13326 291 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 TCEAL6Q6IPX3 200 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 KIAA1161Q6NSJ0 714 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 NPNTQ6UXI9 565 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 NT5DC3Q86UY8 548 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 HORMAD1Q86X24 394 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 CAMK1DQ8IU85 385 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 CXorf40AQ8TE69 158 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 PDCD6IPQ8WUM4 868 aaKnown RBP13.9□□□□□ -0.18
USF1-205ENST00000473969 TCEAL3Q969E4 200 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 FATE1Q969F0 183 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 SERAC1Q96JX3 654 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 NUDCD1Q96RS6 583 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 LGMNQ99538 433 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 FERMT1Q9BQL6 677 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 EDEM2Q9BV94 578 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 GTPBP2Q9BX10 602 aaKnown RBP13.9□□□□□ -0.18
USF1-205ENST00000473969 HEMGNQ9BXL5 484 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 TM9SF3Q9HD45 589 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 SEPT10Q9P0V9 454 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 CDV3Q9UKY7 258 aaKnown RBP13.9□□□□□ -0.18
USF1-205ENST00000473969 DMTF1Q9Y222 760 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 FADS3Q9Y5Q0 445 aa13.9□□□□□ -0.18
USF1-205ENST00000473969 PTPRZ1P23471 2315 aaPredicted RBP13.9□□□□□ -0.18
USF1-205ENST00000473969 RIF1Q5UIP0 2472 aaKnown RBP13.89□□□□□ -0.19
USF1-205ENST00000473969 A0A0U1RQJ8 604 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 GOLGA6L9A6NEM1 432 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 RNF103O00237 685 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 TJP3O95049 919 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 PEX11BO96011 259 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 ENGP17813 658 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 CA4P22748 312 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 AKT2P31751 481 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 TAS2R38P59533 333 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 MAXP61244 160 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 PPP2CBP62714 309 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 RACK1P63244 317 aaKnown RBP13.89□□□□□ -0.19
USF1-205ENST00000473969 PPP2CAP67775 309 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 PPIDQ08752 370 aaKnown RBP13.89□□□□□ -0.19
USF1-205ENST00000473969 GSE1Q14687 1217 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 STAT4Q14765 748 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 TAZQ16635 292 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 IL27RAQ6UWB1 636 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 NDUFAF2Q8N183 169 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 TEX26Q8N6G2 289 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 NETO1Q8TDF5 533 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 TFB1MQ8WVM0 346 aaKnown RBP13.89□□□□□ -0.19
USF1-205ENST00000473969 MAML1Q92585 1016 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 MGME1Q9BQP7 344 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 OSBPL8Q9BZF1 889 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 ZDHHC5Q9C0B5 715 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 EFR3BQ9Y2G0 817 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 EP300Q09472 2414 aaPredicted RBP13.89□□□□□ -0.19
USF1-205ENST00000473969 OTOGLQ3ZCN5 2332 aa13.89□□□□□ -0.19
USF1-205ENST00000473969 PRAMEF26H0Y7S4 382 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 ARHGAP33O14559 1287 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 MUSKO15146 869 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 SLC31A1O15431 190 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 MTSS1O43312 755 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 LATO43561 262 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 MAGEC1O60732 1142 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 SOCS5O75159 536 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 JCHAINP01591 159 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 TIMP2P16035 220 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 ABL2P42684 1182 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 PEX5P50542 639 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 UGP2Q16851 508 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 NAPEPLDQ6IQ20 393 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 ZNF662Q6ZS27 426 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 BBS12Q6ZW61 710 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms