RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 C15orf59Q2T9L4 293 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-212ENST00000473961 FBXO43Q4G163 708 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 TTC39AQ5SRH9 613 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 GKAP1Q5VSY0 366 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-212ENST00000473961 ZNF813Q6ZN06 617 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 DNAJC10Q8IXB1 793 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 ZDHHC23Q8IYP9 409 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 KIAA2013Q8IYS2 634 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 HACE1Q8IYU2 909 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 ADGRF4Q8IZF3 695 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 MMABQ96EY8 250 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-212ENST00000473961 ZC3HAV1LQ96H79 300 aaKnown RBP4.44□□□□□ -1.7
BRCA1-212ENST00000473961 RADILQ96JH8 1075 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 ZNF333Q96JL9 665 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 RITA1Q96K30 269 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 SPATA17Q96L03 361 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 HARBI1Q96MB7 349 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 SIN3AQ96ST3 1273 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 GATA5Q9BWX5 397 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-212ENST00000473961 C1QTNF1Q9BXJ1 281 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 PAPOLBQ9NRJ5 636 aaKnown RBP4.44□□□□□ -1.7
BRCA1-212ENST00000473961 SLC6A13Q9NSD5 602 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 NLKQ9UBE8 527 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 ZHX1Q9UKY1 873 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-212ENST00000473961 ADAM18Q9Y3Q7 739 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 SLC4A4Q9Y6R1 1079 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 CAPN7Q9Y6W3 813 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 LOC100509620A0A075B734 347 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 CYP2D7A0A087X1C5 515 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 F8W810 466 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 LIASO43766 372 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 HS6ST1O60243 411 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 RPN1P04843 607 aaKnown RBP4.43□□□□□ -1.7
BRCA1-212ENST00000473961 PRR35P0CG20 571 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 CYP2A6P11509 494 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-212ENST00000473961 SLC16A2P36021 539 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 GARSP41250 739 aaKnown RBP4.43□□□□□ -1.7
BRCA1-212ENST00000473961 DPP6P42658 865 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 CENPAP49450 140 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 RGS19P49795 217 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 RRP1P56182 461 aaKnown RBP4.43□□□□□ -1.7
BRCA1-212ENST00000473961 HDAC4P56524 1084 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 TUBA4AP68366 448 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 IFI35P80217 286 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-212ENST00000473961 ZBED6P86452 979 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 CDC16Q13042 620 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 ZNF268Q14587 947 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-212ENST00000473961 DRAP1Q14919 205 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-212ENST00000473961 KRT24Q2M2I5 525 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 TCTN1Q2MV58 587 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 AWAT1Q58HT5 328 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 KIAA1755Q5JYT7 1200 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 PRAMEF17Q5VTA0 474 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 IGFL4Q6B9Z1 124 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 GLDNQ6ZMI3 551 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-212ENST00000473961 AMIGO2Q86SJ2 522 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 ADGRA1Q86SQ6 560 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 ZCCHC9Q8N567 271 aaKnown RBP4.43□□□□□ -1.7
BRCA1-212ENST00000473961 TMEM217Q8N7C4 229 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 POC5Q8NA72 575 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 AVL9Q8NBF6 648 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 ZNF653Q96CK0 615 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 RNF183Q96D59 192 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 ARHGEF26Q96DR7 871 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 ZFYVE19Q96K21 471 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 TTC14Q96N46 770 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 MRPL1Q9BYD6 325 aaKnown RBP4.43□□□□□ -1.7
BRCA1-212ENST00000473961 CXorf56Q9H5V9 222 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 SCPEP1Q9HB40 452 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 BPIFA1Q9NP55 256 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 SH3GLB2Q9NR46 395 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 TAB2Q9NYJ8 693 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 MARCH4Q9P2E8 410 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-212ENST00000473961 SALL3Q9BXA9 1300 aa4.43□□□□□ -1.7
BRCA1-212ENST00000473961 TARSL2A2RTX5 802 aaKnown RBP4.42□□□□□ -1.7
BRCA1-212ENST00000473961 RHODO00212 210 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 CTDSP2O14595 271 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 PRPF4O43172 522 aaKnown RBP eCLIP4.42□□□□□ -1.7
BRCA1-212ENST00000473961 SEC14L5O43304 696 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 HCRTR2O43614 444 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 NARSO43776 548 aaKnown RBP4.42□□□□□ -1.7
BRCA1-212ENST00000473961 TBCAO75347 108 aaKnown RBP4.42□□□□□ -1.7
BRCA1-212ENST00000473961 ERAL1O75616 437 aaKnown RBP4.42□□□□□ -1.7
BRCA1-212ENST00000473961 SEC31AO94979 1220 aaKnown RBP4.42□□□□□ -1.7
BRCA1-212ENST00000473961 TUBB4AP04350 444 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 SRPRAP08240 638 aaKnown RBP4.42□□□□□ -1.7
BRCA1-212ENST00000473961 ZNF182P17025 639 aaPredicted RBP4.42□□□□□ -1.7
BRCA1-212ENST00000473961 HOXA7P31268 230 aaPredicted RBP4.42□□□□□ -1.7
BRCA1-212ENST00000473961 RFC1P35251 1148 aaPredicted RBP4.42□□□□□ -1.7
BRCA1-212ENST00000473961 UBA7P41226 1012 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 SLC15A1P46059 708 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 PIP4K2AP48426 406 aaPredicted RBP4.42□□□□□ -1.7
BRCA1-212ENST00000473961 PLCB4Q15147 1175 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 NAB2Q15742 525 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 ADIPOQQ15848 244 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 C6orf141Q5SZD1 244 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 CHSY1Q86X52 802 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 DNAAF5Q86Y56 855 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 LURAP1LQ8IV03 231 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms