RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 PON1P27169 355 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 THOP1P52888 689 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 IRF4Q15306 451 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 TBR1Q16650 682 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 KLHL40Q2TBA0 621 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 RETSATQ6NUM9 610 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 RD3Q7Z3Z2 195 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 IRF2BP1Q8IU81 584 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 HID1Q8IV36 788 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 Q8N9G6 341 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-209ENST00000473421 ASB12Q8WXK4 309 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 NAT6Q93015 286 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 CFAP57Q96MR6 1250 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 EPAS1Q99814 870 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 WRAP53Q9BUR4 548 aaKnown RBP12.79□□□□□ -0.36
TRAF4-209ENST00000473421 CPEB1Q9BZB8 566 aaKnown RBP12.79□□□□□ -0.36
TRAF4-209ENST00000473421 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.79□□□□□ -0.36
TRAF4-209ENST00000473421 NCKIPSDQ9NZQ3 722 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 NEU3Q9UQ49 428 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 PCDHGA7Q9Y5G6 932 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 ZFC3H1O60293 1989 aaKnown RBP12.79□□□□□ -0.36
TRAF4-209ENST00000473421 INSIG1O15503 277 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 GJB6O95452 261 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 RPIAP49247 311 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 PPARDQ03181 441 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 SLC20A2Q08357 652 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 STIM1Q13586 685 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 WSCD2Q2TBF2 565 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 MYLK3Q32MK0 819 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 SLC25A52Q3SY17 297 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 LRRC31Q6UY01 552 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 MACC1Q6ZN28 852 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 ENOSF1Q7L5Y1 443 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 PHLDB2Q86SQ0 1253 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 NLRP14Q86W24 1093 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 XYLT1Q86Y38 959 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 EMC1Q8N766 993 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 DENND6BQ8NEG7 585 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 BTN2A2Q8WVV5 523 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 JPH3Q8WXH2 748 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-209ENST00000473421 ARHGEF2Q92974 986 aaKnown RBP12.78□□□□□ -0.36
TRAF4-209ENST00000473421 GFM1Q96RP9 751 aaKnown RBP12.78□□□□□ -0.36
TRAF4-209ENST00000473421 SLC13A1Q9BZW2 595 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 ZYG11BQ9C0D3 744 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 APEX2Q9UBZ4 518 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 DNAI1Q9UI46 699 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 TMEM59LQ9UK28 342 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 PCDHGA4Q9Y5G9 962 aa12.78□□□□□ -0.36
TRAF4-209ENST00000473421 HEMK1Q9Y5R4 338 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-209ENST00000473421 C9orf172C9J069 976 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 GOLGA8SH3BPF8 625 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 KRT9P35527 623 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 MLLT3P42568 568 aaPredicted RBP12.77□□□□□ -0.37
TRAF4-209ENST00000473421 ARSDP51689 593 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 HK3P52790 923 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 INHBCP55103 352 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 ZFP36L1Q07352 338 aaKnown RBP12.77□□□□□ -0.37
TRAF4-209ENST00000473421 FAM102AQ5T9C2 384 aaPredicted RBP12.77□□□□□ -0.37
TRAF4-209ENST00000473421 MANEALQ5VSG8 457 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 ESRP1Q6NXG1 681 aaKnown RBP12.77□□□□□ -0.37
TRAF4-209ENST00000473421 FOXR2Q6PJQ5 311 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 ZNF783Q6ZMS7 281 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 TTC7BQ86TV6 843 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 CREBRFQ8IUR6 639 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 ARL10Q8N8L6 244 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 OR2AP1Q8NGE2 309 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 PMEPA1Q969W9 287 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 ISG20Q96AZ6 181 aaKnown RBP12.77□□□□□ -0.37
TRAF4-209ENST00000473421 TIGD1Q96MW7 591 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 HAPLN3Q96S86 360 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 LRRN3Q9H3W5 708 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 NOL6Q9H6R4 1146 aaKnown RBP12.77□□□□□ -0.37
TRAF4-209ENST00000473421 SYNCQ9H7C4 482 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 DNAJC12Q9UKB3 198 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 ACSL6Q9UKU0 697 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 GPR34Q9UPC5 381 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 LOXL2Q9Y4K0 774 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 OR1A2Q9Y585 309 aa12.77□□□□□ -0.37
TRAF4-209ENST00000473421 NVLO15381 856 aaKnown RBP12.76□□□□□ -0.37
TRAF4-209ENST00000473421 TM7SF2O76062 418 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 PRKCGP05129 697 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 GABRB2P47870 512 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 ATP11AP98196 1134 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 PTK2Q05397 1052 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 PAK1Q13153 545 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 MTA1Q13330 715 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 PTK2BQ14289 1009 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 C15orf59Q2T9L4 293 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-209ENST00000473421 TAF3Q5VWG9 929 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 GDPD4Q6W3E5 623 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 ATG14Q6ZNE5 492 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 DTX1Q86Y01 620 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 PTRH1Q86Y79 214 aaKnown RBP12.76□□□□□ -0.37
TRAF4-209ENST00000473421 PLPP6Q8IY26 295 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 PLA2G15Q8NCC3 412 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 CCL4L1Q8NHW4 92 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 USP7Q93009 1102 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 RAB7BQ96AH8 199 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 PDXPQ96GD0 296 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 CCDC34Q96HJ3 373 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms