RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 SMARCE1Q969G3 411 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 LIN37Q96GY3 246 aaPredicted RBP9.48□□□□□ -0.89
VCL-204ENST00000472585 PSMG3-AS1Q96PY0 264 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 PPP1R9BQ96SB3 815 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 TBCBQ99426 244 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 CCDC3Q9BQI4 270 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 HEPHQ9BQS7 1158 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 LRRC61Q9BV99 259 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 C2orf49Q9BVC5 232 aaPredicted RBP9.48□□□□□ -0.89
VCL-204ENST00000472585 TRIM62Q9BVG3 475 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 SRRTQ9BXP5 876 aaKnown RBP9.48□□□□□ -0.89
VCL-204ENST00000472585 EPN3Q9H201 632 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 ADNPQ9H2P0 1102 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 PCDHGC3Q9UN70 934 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 DOPEY1Q5JWR5 2465 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 RP1L1Q8IWN7 2480 aaPredicted RBP9.48□□□□□ -0.89
VCL-204ENST00000472585 UNC13CQ8NB66 2214 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 RELNP78509 3460 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 ABCA12Q86UK0 2595 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 A0A1W2PQM1 296 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 C16orf96A6NNT2 1141 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 C3orf80F5H4A9 247 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 MED7O43513 233 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 AP1G1O43747 822 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 DAB1O75553 588 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 JMJD7P0C870 316 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 PNMA6AP0CW24 399 aaPredicted RBP9.47□□□□□ -0.89
VCL-204ENST00000472585 TSHRP16473 764 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 UGT1A5P35504 534 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 IGFALSP35858 605 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 ACVRL1P37023 503 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 RABIFP47224 123 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 SERPINH1P50454 418 aaKnown RBP9.47□□□□□ -0.89
VCL-204ENST00000472585 DNA2P51530 1060 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 CCNHP51946 323 aaPredicted RBP9.47□□□□□ -0.89
VCL-204ENST00000472585 RNASE9P60153 205 aaKnown RBP9.47□□□□□ -0.89
VCL-204ENST00000472585 CYP4F2P78329 520 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 MORC3Q14149 939 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 ARHGAP44Q17R89 818 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 C2CD6Q53TS8 623 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 PRRT3Q5FWE3 981 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 LRRC73Q5JTD7 316 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 KLHL10Q6JEL2 608 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 KIAA1161Q6NSJ0 714 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 SLC26A9Q7LBE3 791 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 BNIPLQ7Z465 357 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 ZNF397Q8NF99 534 aaPredicted RBP9.47□□□□□ -0.89
VCL-204ENST00000472585 OR6K2Q8NGY2 324 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 NELFBQ8WX92 580 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 SHC3Q92529 594 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 C1orf74Q96LT6 269 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 SPON2Q9BUD6 331 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 WDCPQ9H6R7 721 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 SIX2Q9NPC8 291 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 DYRK4Q9NR20 520 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 PADI4Q9UM07 663 aa9.47□□□□□ -0.89
VCL-204ENST00000472585 SCN8AQ9UQD0 1980 aa9.46□□□□□ -0.89
VCL-204ENST00000472585 LRRK1Q38SD2 2015 aa9.46□□□□□ -0.89
VCL-204ENST00000472585 ILVBLA1L0T0 632 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 CLEC18AA5D8T8 446 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 LMO7DNF2Z398 122 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 AGRPO00253 132 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 FOXN3O00409 490 aaPredicted RBP9.46□□□□□ -0.9
VCL-204ENST00000472585 FPGTO14772 594 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 PSMA7O14818 248 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 AREL1O15033 823 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 MMP20O60882 483 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 SRGAP2O75044 1071 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 USP8P40818 1118 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 CASRP41180 1078 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 CCL7P80098 99 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 CETN1Q12798 172 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 CLCA4Q14CN2 919 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 TCEA2Q15560 299 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 ESRP1Q6NXG1 681 aaKnown RBP9.46□□□□□ -0.9
VCL-204ENST00000472585 BORAQ6PGQ7 559 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 TRIM65Q6PJ69 517 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 CLEC18BQ6UXF7 455 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 LEKR1Q6ZMV7 388 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 TMPRSS9Q7Z410 1059 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 VASH2Q86V25 355 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 SLC47A2Q86VL8 602 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 IRF2BP1Q8IU81 584 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 PHACTR4Q8IZ21 702 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 CLEC18CQ8NCF0 446 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 BTN2A2Q8WVV5 523 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 ASB12Q8WXK4 309 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 PGAP3Q96FM1 320 aaPredicted RBP9.46□□□□□ -0.9
VCL-204ENST00000472585 GFM1Q96RP9 751 aaKnown RBP9.46□□□□□ -0.9
VCL-204ENST00000472585 FOXP3Q9BZS1 431 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 TM6SF2Q9BZW4 377 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 ZDHHC6Q9H6R6 413 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 HECAQ9UBI9 543 aaPredicted RBP9.46□□□□□ -0.9
VCL-204ENST00000472585 PISDQ9UG56 409 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 ANAPC2Q9UJX6 822 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 ACSL6Q9UKU0 697 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 CTNND2Q9UQB3 1225 aa9.46□□□□□ -0.9
VCL-204ENST00000472585 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.46□□□□□ -0.9
VCL-204ENST00000472585 NBPF19A0A087WUL8 3843 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 FAM72CH0Y354 149 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms