RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 FAM183BPQ6ZVS7 135 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 CFAP206Q8IYR0 622 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 ZNF606Q8WXB4 792 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 FIG4Q92562 907 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 GFM2Q969S9 779 aaKnown RBP8.64□□□□□ -1.03
CD47-204ENST00000471694 HEPHQ9BQS7 1158 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 PCDHA2Q9Y5H9 948 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 PXDNLA1KZ92 1463 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 B4GALT5O43286 388 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 PFDN1O60925 122 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 CLDN11O75508 207 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 NOL4O94818 638 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 SSR2P43308 183 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 ILF2Q12905 390 aaKnown RBP8.64□□□□□ -1.03
CD47-204ENST00000471694 SLC13A2Q13183 592 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 CNGA3Q16281 694 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 VARS2Q5ST30 1063 aaKnown RBP8.64□□□□□ -1.03
CD47-204ENST00000471694 SCARA3Q6AZY7 606 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 PEX5LQ8IYB4 626 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 TMEM156Q8N614 296 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 UTP15Q8TED0 518 aaKnown RBP8.64□□□□□ -1.03
CD47-204ENST00000471694 BRI3BPQ8WY22 251 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 AIF1LQ9BQI0 150 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 IL36AQ9UHA7 158 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 ASTN2O75129 1339 aaPredicted RBP8.64□□□□□ -1.03
CD47-204ENST00000471694 UBXN7O94888 489 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 MAXP61244 160 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 CSTF1Q05048 431 aaKnown RBP8.64□□□□□ -1.03
CD47-204ENST00000471694 RAPSNQ13702 412 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 STXBP5Q5T5C0 1151 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 GRTP1Q5TC63 336 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 HGSNATQ68CP4 663 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 CERS5Q8N5B7 392 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 EME1Q96AY2 570 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 IL23AQ9NPF7 189 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 ZNF229Q9UJW7 825 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 ANKRD63C9JTQ0 380 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 TNFSF9P41273 254 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 SLC7A2P52569 658 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 CASP8Q14790 479 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 PDPK2PQ6A1A2 396 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 NCSTNQ92542 709 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 AP2M1Q96CW1 435 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 USB1Q9BQ65 265 aaKnown RBP8.64□□□□□ -1.03
CD47-204ENST00000471694 NAT9Q9BTE0 207 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 CDHR5Q9HBB8 845 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 POU2F3Q9UKI9 436 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 CASKO14936 926 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 CHRNA1P02708 482 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 PIRTP0C851 137 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 RFX5P48382 616 aaPredicted RBP8.64□□□□□ -1.03
CD47-204ENST00000471694 CAPSQ13938 189 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 C11orf63Q6NUN7 778 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 GALNT4Q8N4A0 578 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 MTMR14Q8NCE2 650 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 ZNF483Q8TF39 744 aaPredicted RBP8.64□□□□□ -1.03
CD47-204ENST00000471694 ATG4AQ8WYN0 398 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 ALDH8A1Q9H2A2 487 aaPredicted RBP8.64□□□□□ -1.03
CD47-204ENST00000471694 EQTNQ9NQ60 294 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 ABCB8Q9NUT2 735 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 HCN2Q9UL51 889 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 ATXN2Q99700 1313 aaKnown RBP8.63□□□□□ -1.03
CD47-204ENST00000471694 ZNF185O15231 689 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 MSI1O43347 362 aaKnown RBP8.63□□□□□ -1.03
CD47-204ENST00000471694 WBP4O75554 376 aaKnown RBP8.63□□□□□ -1.03
CD47-204ENST00000471694 IL33O95760 270 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 CCNB1P14635 433 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 NRG3P56975 720 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 TRAF2Q12933 501 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 HYIQ5T013 277 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 FNBP1LQ5T0N5 605 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 OLFML2BQ68BL8 750 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 RFWD3Q6PCD5 774 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 SEMA4DQ92854 862 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 RELTQ969Z4 430 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 RAD51AP1Q96B01 352 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 MRPL45Q9BRJ2 306 aaKnown RBP8.63□□□□□ -1.03
CD47-204ENST00000471694 CARS2Q9HA77 564 aaKnown RBP8.63□□□□□ -1.03
CD47-204ENST00000471694 DUSP12Q9UNI6 340 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 CCDC154A6NI56 674 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 KLF8O95600 359 aaPredicted RBP8.63□□□□□ -1.03
CD47-204ENST00000471694 MT-CO1P00395 513 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 PBX3P40426 434 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 PTENP60484 403 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 GHRHRQ02643 423 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 LINGO4Q6UY18 593 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 GRAMD1AQ96CP6 724 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 ADAM7Q9H2U9 754 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 CD207Q9UJ71 328 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 A0A087X1B8 175 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 CDK14O94921 469 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 MC4RP32245 332 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 CXCR3P49682 368 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 SEPHS1P49903 392 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 FOXK1P85037 733 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 RBBP4Q09028 425 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 UBXN11Q5T124 520 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 LPCAT2Q7L5N7 544 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 PEG10Q86TG7 708 aaKnown RBP8.63□□□□□ -1.03
CD47-204ENST00000471694 PIGZQ86VD9 579 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms