RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 C14orf80Q86SX3 495 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 CHST14Q8NCH0 376 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 TMEM35BQ8NCS4 154 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 LMX1AQ8TE12 382 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 SCG3Q8WXD2 468 aaKnown RBP9.28□□□□□ -0.92
CPSF4-211ENST00000471455 PGAP3Q96FM1 320 aaPredicted RBP9.28□□□□□ -0.92
CPSF4-211ENST00000471455 SLC46A1Q96NT5 459 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 NPY6RQ99463 290 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 OSBPL1AQ9BXW6 950 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 SLC13A1Q9BZW2 595 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 ZYG11BQ9C0D3 744 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 TNKS2Q9H2K2 1166 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 CLMPQ9H6B4 373 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 RETREG1Q9H6L5 497 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 RAB6BQ9NRW1 208 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 PIGVQ9NUD9 493 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 APOBEC3BQ9UH17 382 aaKnown RBP9.28□□□□□ -0.92
CPSF4-211ENST00000471455 DOLKQ9UPQ8 538 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 FADS3Q9Y5Q0 445 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 DOCK9Q9BZ29 2069 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 MYO18BQ8IUG5 2567 aa9.27□□□□□ -0.92
CPSF4-211ENST00000471455 IGLV3-10A0A075B6K4 115 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 A0A0D9SEW6 157 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 LY6G6EA0A0G2JKS1 128 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 POM121BA6NF01 834 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 BECN2A8MW95 431 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 K7ENP7 123 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 SMAD6O43541 496 aaKnown RBP9.27□□□□□ -0.93
CPSF4-211ENST00000471455 ENDOD1O94919 500 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 ITGA2BP08514 1039 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 TGM2P21980 687 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 BLKP51451 505 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 STX17P56962 302 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 RNASE9P60153 205 aaKnown RBP9.27□□□□□ -0.93
CPSF4-211ENST00000471455 YPEL5P62699 121 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 GNA12Q03113 381 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 MORC3Q14149 939 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 DEFB133Q30KQ1 61 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 SLC25A52Q3SY17 297 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 PTPN20Q4JDL3 420 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 FAM102AQ5T9C2 384 aaPredicted RBP9.27□□□□□ -0.93
CPSF4-211ENST00000471455 GUSBP11Q6P575 273 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 INO80CQ6PI98 192 aaPredicted RBP9.27□□□□□ -0.93
CPSF4-211ENST00000471455 CLEC14AQ86T13 490 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 FSTL5Q8N475 847 aaPredicted RBP9.27□□□□□ -0.93
CPSF4-211ENST00000471455 RYBPQ8N488 228 aaPredicted RBP9.27□□□□□ -0.93
CPSF4-211ENST00000471455 WDTC1Q8N5D0 677 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 TTC9Q92623 222 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 ISG20Q96AZ6 181 aaKnown RBP9.27□□□□□ -0.93
CPSF4-211ENST00000471455 ATXN7L3BQ96GX2 97 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 BMFQ96LC9 184 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 HAPLN3Q96S86 360 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 CRACR2AQ9BSW2 395 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 STRADBQ9C0K7 418 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 ZDHHC6Q9H6R6 413 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 SYNDIG1Q9H7V2 258 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 ACP6Q9NPH0 428 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 HECAQ9UBI9 543 aaPredicted RBP9.27□□□□□ -0.93
CPSF4-211ENST00000471455 HPCAL4Q9UM19 191 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 ENTPD2Q9Y5L3 495 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 HEMK1Q9Y5R4 338 aaPredicted RBP9.27□□□□□ -0.93
CPSF4-211ENST00000471455 U3KQA8 63 aa9.27□□□□□ -0.93
CPSF4-211ENST00000471455 NAV2Q8IVL1 2488 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 CDRT15L2A8MXV6 281 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 LMO7DNF2Z398 122 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 MUSKO15146 869 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 RAD51BO15315 384 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 SLC28A2O43868 658 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 SRGAP2O75044 1071 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 LSM8O95777 96 aaKnown RBP9.26□□□□□ -0.93
CPSF4-211ENST00000471455 GSRP00390 522 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 ALPIP09923 528 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 MYF5P13349 255 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 MAPKAPK2P49137 400 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 PFN3P60673 137 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 SNRPD1P62314 119 aaKnown RBP9.26□□□□□ -0.93
CPSF4-211ENST00000471455 RAD51Q06609 339 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 LY6DQ14210 128 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 ZSCAN23Q3MJ62 389 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 ARL13BQ3SXY8 428 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 ZNF805Q5CZA5 627 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 PRRT3Q5FWE3 981 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 OTUD1Q5VV17 481 aaPredicted RBP9.26□□□□□ -0.93
CPSF4-211ENST00000471455 FOXR1Q6PIV2 292 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 MACC1Q6ZN28 852 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 PARS2Q7L3T8 475 aaKnown RBP9.26□□□□□ -0.93
CPSF4-211ENST00000471455 CREBRFQ8IUR6 639 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 ZNF683Q8IZ20 524 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 PHACTR4Q8IZ21 702 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 SDR16C5Q8N3Y7 309 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 ARL10Q8N8L6 244 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 PLPP7Q8NBV4 271 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 OR7D4Q8NG98 312 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 OR6C4Q8NGE1 309 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 ATL2Q8NHH9 583 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 NT5C3BQ969T7 300 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 C18orf8Q96DM3 657 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 LIN37Q96GY3 246 aaPredicted RBP9.26□□□□□ -0.93
CPSF4-211ENST00000471455 UCN2Q96RP3 112 aa9.26□□□□□ -0.93
CPSF4-211ENST00000471455 CCNL2Q96S94 520 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms