RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 DENND4AQ7Z401 1863 aa9.48□□□□□ -0.89
VPS52-216ENST00000471309 FAM47DPA6NHR8 397 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 FOXO6A8MYZ6 492 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 RFXAPO00287 272 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 UGT1A9O60656 530 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 SNRPAP09012 282 aaKnown RBP9.47□□□□□ -0.89
VPS52-216ENST00000471309 ERVK-10P10266 1014 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 TYRP14679 529 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 CHN1P15882 459 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 CREB1P16220 341 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 HOXB8P17481 243 aaPredicted RBP9.47□□□□□ -0.89
VPS52-216ENST00000471309 KRT4P19013 534 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 GBP2P32456 591 aaPredicted RBP9.47□□□□□ -0.89
VPS52-216ENST00000471309 GP5P40197 560 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 CSNK1DP48730 415 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 SCNN1BP51168 640 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 GNGT1P63211 74 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 GUCY1A3Q02108 690 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 SULT2A1Q06520 285 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 DNAJC3Q13217 504 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 SEPT6Q14141 434 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 GALNT3Q14435 633 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 FUT11Q495W5 492 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 TCEAL5Q5H9L2 206 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 FAM78AQ5JUQ0 283 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 LY6G5CQ5SRR4 150 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 NCEH1Q6PIU2 408 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 PACS1Q6VY07 963 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 KDELC2Q7Z4H8 507 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 CNTN4Q8IWV2 1026 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 ADGRG2Q8IZP9 1017 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 ATXN2LQ8WWM7 1075 aaKnown RBP9.47□□□□□ -0.89
VPS52-216ENST00000471309 FGF13Q92913 245 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 RSPRY1Q96DX4 576 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 SGSM3Q96HU1 749 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 ASB16Q96NS5 453 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 CPNE1Q99829 537 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 FAM167BQ9BTA0 163 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 UGT1A7Q9HAW7 530 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 UGT1A10Q9HAW8 530 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 UGT1A8Q9HAW9 530 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 C20orf96Q9NUD7 363 aaPredicted RBP9.47□□□□□ -0.89
VPS52-216ENST00000471309 MKS1Q9NXB0 559 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 TXNDC16Q9P2K2 825 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 GGA2Q9UJY4 613 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 INTS6Q9UL03 887 aaKnown RBP9.47□□□□□ -0.89
VPS52-216ENST00000471309 RIMKLBQ9ULI2 386 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 HS3ST2Q9Y278 367 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 FCF1Q9Y324 198 aaKnown RBP9.47□□□□□ -0.89
VPS52-216ENST00000471309 DOCK6Q96HP0 2047 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 KIAA1549LQ6ZVL6 1849 aa9.47□□□□□ -0.89
VPS52-216ENST00000471309 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.46□□□□□ -0.9
VPS52-216ENST00000471309 A0A1W2PPM1 405 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 MROH6A6NGR9 719 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 TRIM49D1C9J1S8 452 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 LINC01565O15544 149 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 HOXC11O43248 304 aaPredicted RBP9.46□□□□□ -0.9
VPS52-216ENST00000471309 LDB2O43679 373 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 TYROBPO43914 113 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 SIN3BO75182 1162 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 IGSF6O95976 241 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 ADH1CP00326 375 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 MT-CO1P00395 513 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 MT-ND3P03897 115 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 CYP17A1P05093 508 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 PABPC1P11940 636 aaKnown RBP9.46□□□□□ -0.9
VPS52-216ENST00000471309 ARNTP27540 789 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 LSP1P33241 339 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 CCNFP41002 786 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 LIMK2P53671 638 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 CSE1LP55060 971 aaKnown RBP9.46□□□□□ -0.9
VPS52-216ENST00000471309 ACVR1Q04771 509 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 TRAF2Q12933 501 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 EML3Q32P44 896 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 TSTD2Q5T7W7 516 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 GRTP1Q5TC63 336 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 ASTLQ6HA08 431 aaPredicted RBP9.46□□□□□ -0.9
VPS52-216ENST00000471309 SYCE2Q6PIF2 218 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 TIFABQ6ZNK6 161 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 GET4Q7L5D6 327 aaPredicted RBP9.46□□□□□ -0.9
VPS52-216ENST00000471309 KIAA0907Q7Z7F0 614 aaPredicted RBP9.46□□□□□ -0.9
VPS52-216ENST00000471309 SRLQ86TD4 932 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 AHI1Q8N157 1196 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 C4orf33Q8N1A6 199 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 BANPQ8N9N5 519 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 MDM1Q8TC05 714 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 BPIFB1Q8TDL5 484 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 ISG20Q96AZ6 181 aaKnown RBP9.46□□□□□ -0.9
VPS52-216ENST00000471309 APOPT1Q96IL0 206 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 NSMCE3Q96MG7 304 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 ZNF778Q96MU6 729 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 LRRC3BQ96PB8 259 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 RBBP8Q99708 897 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 MCMBPQ9BTE3 642 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 ADGRE3Q9BY15 652 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 CEP44Q9C0F1 390 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 LINC00597Q9H2U6 94 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 IGFLR1Q9H665 355 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 CCDC134Q9H6E4 229 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 KCNK9Q9NPC2 374 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms