RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 DNAJC16Q9Y2G8 782 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 GDAQ9Y2T3 454 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 RRP7AQ9Y3A4 280 aaKnown RBP1.5□□□□□ -2.17
UBXN4-207ENST00000471246 CLDN16Q9Y5I7 305 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 TAF1P21675 1872 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 IGLV5-37A0A075B6J1 123 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 SAA2-SAA4A0A096LPE2 208 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 A0A0B4J293 547 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.49□□□□□ -2.17
UBXN4-207ENST00000471246 CBY3A6NI87 242 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 B9A039 149 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 NPIPB11E5RHQ5 1161 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 EBAG9O00559 213 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 PEX12O00623 359 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 DHX16O60231 1041 aaKnown RBP1.49□□□□□ -2.17
UBXN4-207ENST00000471246 CEP104O60308 925 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 ATP2C2O75185 946 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 KRT36O76013 467 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 VNN2O95498 520 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 F7P08709 466 aaPredicted RBP1.49□□□□□ -2.17
UBXN4-207ENST00000471246 WEE2P0C1S8 567 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 IGHV4-30-4P0DP06 118 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 TFPIP10646 304 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 FMO4P31512 558 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 KRTAP10-3P60369 221 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 CYP4A11Q02928 519 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 POU3F1Q03052 451 aaPredicted RBP1.49□□□□□ -2.17
UBXN4-207ENST00000471246 ILF3Q12906 894 aaKnown RBP eCLIP1.49□□□□□ -2.17
UBXN4-207ENST00000471246 DLG1Q12959 904 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 KRT72Q14CN4 511 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 SF3B4Q15427 424 aaKnown RBP eCLIP1.49□□□□□ -2.172e-6■■□□□ 12.6
UBXN4-207ENST00000471246 TAF5Q15542 800 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 PDCD2Q16342 344 aaPredicted RBP1.49□□□□□ -2.17
UBXN4-207ENST00000471246 SLC18A3Q16572 532 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 ADCK5Q3MIX3 580 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 PLEKHO1Q53GL0 409 aaPredicted RBP1.49□□□□□ -2.17
UBXN4-207ENST00000471246 DCAF6Q58WW2 860 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 CBWD5Q5RIA9 395 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 FAM69BQ5VUD6 431 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 RHBDF2Q6PJF5 856 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 KLHL24Q6TFL4 600 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 IL20RBQ6UXL0 311 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 GSG1LQ6UXU4 331 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 CCDC129Q6ZRS4 1044 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 NEK10Q6ZWH5 1172 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 NOL8Q76FK4 1167 aaKnown RBP1.49□□□□□ -2.17
UBXN4-207ENST00000471246 MOGAT3Q86VF5 341 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 CHD1LQ86WJ1 897 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 TMPRSS12Q86WS5 348 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 C2CD5Q86YS7 1000 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 PGBD5Q8N414 524 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 ENAHQ8N8S7 591 aaPredicted RBP1.49□□□□□ -2.17
UBXN4-207ENST00000471246 ZNF114Q8NC26 417 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 ZMIZ2Q8NF64 920 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 SPATA20Q8TB22 786 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 SPPL3Q8TCT6 385 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 GDPD5Q8WTR4 605 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 TMEM170AQ8WVE7 144 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 SECTM1Q8WVN6 248 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 RAB40AQ8WXH6 277 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 TRIB2Q92519 343 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 HSPH1Q92598 858 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 BICD1Q96G01 975 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 HES6Q96HZ4 224 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 IL17FQ96PD4 163 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 FAM167BQ9BTA0 163 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 SPRY4Q9C004 299 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 MROH8Q9H579 483 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 STN1Q9H668 368 aaKnown RBP1.49□□□□□ -2.17
UBXN4-207ENST00000471246 SPATS2LQ9NUQ6 558 aaKnown RBP1.49□□□□□ -2.17
UBXN4-207ENST00000471246 ANKRD10Q9NXR5 420 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 DONSONQ9NYP3 566 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 PAM16Q9Y3D7 125 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 RIPOR2Q9Y4F9 1068 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 NFS1Q9Y697 457 aa1.49□□□□□ -2.17
UBXN4-207ENST00000471246 GREB1LQ9C091 1923 aaPredicted RBP1.48□□□□□ -2.17
UBXN4-207ENST00000471246 A0A0U1RQF3 1178 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 C17orf113A0A1B0GUU1 675 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 hCG_1642624A0A1W2PR95 340 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 VWA3AA6NCI4 1184 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 PABPN1LA6NDY0 278 aaKnown RBP1.48□□□□□ -2.17
UBXN4-207ENST00000471246 FAM90A7PA6NKC0 464 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 HSPB2A8KAH6 182 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 FAM90A22PA8MWA6 464 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 FAM90A12PA8MX19 464 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 FAM90A23PA8MXZ1 464 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 PRAC2D3DTV9 90 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 CLGNO14967 610 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 PER2O15055 1255 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 IRAK2O43187 625 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 ANP32CO43423 234 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 RGS11O94810 467 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 CHRM4P08173 479 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 CNPP09543 421 aaKnown RBP1.48□□□□□ -2.17
UBXN4-207ENST00000471246 DHRS4L1P0CG22 281 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 SRD5A1P18405 259 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 TCEA1P23193 301 aaKnown RBP1.48□□□□□ -2.17
UBXN4-207ENST00000471246 SSTR2P30874 369 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 PIGAP37287 484 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 LIFRP42702 1097 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms