RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 HDDC3Q8N4P3 179 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 ZBTB44Q8NCP5 570 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 TMIEQ8NEW7 156 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 KIF18AQ8NI77 898 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 CCDC110Q8TBZ0 833 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 PDCD6IPQ8WUM4 868 aaKnown RBP13.8□□□□□ -0.2
LMNA-210ENST00000469565 ZNF419Q96HQ0 510 aaPredicted RBP13.8□□□□□ -0.2
LMNA-210ENST00000469565 TEKT5Q96M29 485 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 KLHL32Q96NJ5 620 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 NUDCD1Q96RS6 583 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 OMDQ99983 421 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 USP29Q9HBJ7 922 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 NOD2Q9HC29 1040 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 GLOD4Q9HC38 313 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 CD248Q9HCU0 757 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 PRMT8Q9NR22 394 aaPredicted RBP13.8□□□□□ -0.2
LMNA-210ENST00000469565 ZSCAN32Q9NX65 697 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 RNF14Q9UBS8 474 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 AMACRQ9UHK6 382 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 RSPH14Q9UHP6 348 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 PPM1HQ9ULR3 514 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 SMG5Q9UPR3 1016 aaKnown RBP13.8□□□□□ -0.2
LMNA-210ENST00000469565 NCKAP1Q9Y2A7 1128 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 ATP8A1Q9Y2Q0 1164 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 THADAQ6YHU6 1953 aa13.8□□□□□ -0.2
LMNA-210ENST00000469565 DOCK9Q9BZ29 2069 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 SDK1Q7Z5N4 2213 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 A0A1W2PP55 124 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 PDE2AO00408 941 aaPredicted RBP13.79□□□□□ -0.2
LMNA-210ENST00000469565 ZNF189O75820 626 aaPredicted RBP13.79□□□□□ -0.2
LMNA-210ENST00000469565 PAPSS2O95340 614 aaPredicted RBP13.79□□□□□ -0.2
LMNA-210ENST00000469565 ADH1BP00325 375 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 NFKB1P19838 968 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 C5AR1P21730 350 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 CES1P23141 567 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 STIP1P31948 543 aaKnown RBP13.79□□□□□ -0.2
LMNA-210ENST00000469565 CD86P42081 329 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 MAPK8P45983 427 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 METAP1P53582 386 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 GDF10P55107 478 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 AP1S1P61966 158 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 NIPAL4Q0D2K0 466 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 GRM3Q14832 879 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 OASLQ15646 514 aaKnown RBP13.79□□□□□ -0.2
LMNA-210ENST00000469565 NCEH1Q6PIU2 408 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 ARHGEF18Q6ZSZ5 1173 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 CAMK1DQ8IU85 385 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 TAB3Q8N5C8 712 aaPredicted RBP13.79□□□□□ -0.2
LMNA-210ENST00000469565 CCDC89Q8N998 374 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 RLN3Q8WXF3 142 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 PPP1R16AQ96I34 528 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 RBM15Q96T37 977 aaKnown RBP eCLIP13.79□□□□□ -0.22e-7■■□□□ 13.1
LMNA-210ENST00000469565 CPEB1Q9BZB8 566 aaKnown RBP13.79□□□□□ -0.2
LMNA-210ENST00000469565 EPC1Q9H2F5 836 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 SUV39H2Q9H5I1 410 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 ATP13A3Q9H7F0 1226 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 CD93Q9NPY3 652 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 FBXL12Q9NXK8 326 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 TRHDEQ9UKU6 1024 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 CYP8B1Q9UNU6 501 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 DRG1Q9Y295 367 aaKnown RBP13.79□□□□□ -0.2
LMNA-210ENST00000469565 PCDHGC4Q9Y5F7 938 aa13.79□□□□□ -0.2
LMNA-210ENST00000469565 GON4LQ3T8J9 2241 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 SPAG17Q6Q759 2223 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.78□□□□□ -0.2
LMNA-210ENST00000469565 ESPNB1AK53 854 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 LILRB5O75023 590 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 PHF2O75151 1096 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 RNASEH2AO75792 299 aaKnown RBP13.78□□□□□ -0.2
LMNA-210ENST00000469565 ITGAVP06756 1048 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 SERPINF2P08697 491 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 ETS1P14921 441 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 CR2P20023 1033 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 XPAP23025 273 aaPredicted RBP13.78□□□□□ -0.2
LMNA-210ENST00000469565 SERPINA4P29622 427 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 CD68P34810 354 aaPredicted RBP13.78□□□□□ -0.2
LMNA-210ENST00000469565 COILP38432 576 aaPredicted RBP13.78□□□□□ -0.2
LMNA-210ENST00000469565 SFSWAPQ12872 951 aaKnown RBP13.78□□□□□ -0.2
LMNA-210ENST00000469565 PCSK7Q16549 785 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 USP39Q53GS9 565 aaKnown RBP13.78□□□□□ -0.2
LMNA-210ENST00000469565 ZNF805Q5CZA5 627 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 ITPRIPL1Q6GPH6 555 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 DRICH1Q6PGQ1 229 aaPredicted RBP13.78□□□□□ -0.2
LMNA-210ENST00000469565 CCDC137Q6PK04 289 aaKnown RBP13.78□□□□□ -0.2
LMNA-210ENST00000469565 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.78□□□□□ -0.2
LMNA-210ENST00000469565 KDELC2Q7Z4H8 507 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 PRUNE1Q86TP1 453 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 RASSF3Q86WH2 238 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 KLHL7Q8IXQ5 586 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 ATL2Q8NHH9 583 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 ARRDC2Q8TBH0 407 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 ARRDC3Q96B67 414 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 LRIG1Q96JA1 1093 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 SPATA13Q96N96 652 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 TUBGCP5Q96RT8 1024 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 OSBPL1AQ9BXW6 950 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 SLC25A51Q9H1U9 297 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 PABPC3Q9H361 631 aaKnown RBP13.78□□□□□ -0.2
LMNA-210ENST00000469565 UBP1Q9NZI7 540 aa13.78□□□□□ -0.2
LMNA-210ENST00000469565 EBF1Q9UH73 591 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms