RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ESCO2Q56NI9 601 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 RBM48Q5RL73 367 aaKnown RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 HYIQ5T013 277 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 C12orf60Q5U649 245 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 BROXQ5VW32 411 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 MAP1SQ66K74 1059 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 LMBR1LQ6UX01 489 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 BNC2Q6ZN30 1099 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 SPATC1Q76KD6 591 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 NIPA1Q7RTP0 329 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 PTF1AQ7RTS3 328 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 DGKHQ86XP1 1220 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 ZNF677Q86XU0 584 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 MAPKAPK5Q8IW41 473 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 CCDC60Q8IWA6 550 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 TBC1D21Q8IYX1 336 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 PGAM4Q8N0Y7 254 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 TCAIMQ8N3R3 496 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 ZCCHC7Q8N3Z6 543 aaKnown RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 SFRP1Q8N474 314 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 SLC15A4Q8N697 577 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 NATD1Q8N6N6 113 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 KYQ8NBH2 561 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 OR13F1Q8NGS4 319 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 ETNPPLQ8TBG4 499 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 SETD6Q8TBK2 473 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 MCOLN3Q8TDD5 553 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 ANKRD49Q8WVL7 239 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 ALG3Q92685 438 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 TFAP2CQ92754 450 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 LRRC59Q96AG4 307 aaKnown RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 FAM149B1Q96BN6 582 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 ERLEC1Q96DZ1 483 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 ASIC4Q96FT7 647 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 BTN2A3PQ96KV6 586 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 SPATA17Q96L03 361 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 CEP170P1Q96L14 293 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 RIPOR3Q96MK2 946 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 TMEM74Q96NL1 305 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 RDH12Q96NR8 316 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 MTMR9Q96QG7 549 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 CDK5RAP1Q96SZ6 601 aaKnown RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 SECISBP2Q96T21 854 aaKnown RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 SMAD5Q99717 465 aaKnown RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 AGPAT1Q99943 283 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 APOL4Q9BPW4 351 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 TMEM79Q9BSE2 394 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 SYT11Q9BT88 431 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 C9orf16Q9BUW7 83 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 KIFC1Q9BW19 673 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 ACAT2Q9BWD1 397 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 BRIP1Q9BX63 1249 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 PLA2G12BQ9BX93 195 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 NPLQ9BXD5 320 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 MRPL9Q9BYD2 267 aaKnown RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 GLT8D2Q9H1C3 349 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 ATXN3LQ9H3M9 355 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 DPEP3Q9H4B8 488 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 GSX1Q9H4S2 264 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 IFT22Q9H7X7 185 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 VPS37BQ9H9H4 285 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 EFCAB1Q9HAE3 211 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 SCPEP1Q9HB40 452 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 TRIM39Q9HCM9 518 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 C6orf50Q9HD87 102 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 SAYSD1Q9NPB0 183 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 KCNQ5Q9NR82 932 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 DCAF16Q9NXF7 216 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 TAS2R7Q9NYW3 318 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 UBP1Q9NZI7 540 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 KCND2Q9NZV8 630 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 ENPP5Q9UJA9 477 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 MID2Q9UJV3 735 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 ACAD8Q9UKU7 415 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 TMCC3Q9ULS5 477 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 TLR6Q9Y2C9 796 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 PTPN22Q9Y2R2 807 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 NR2E1Q9Y466 385 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 PCDHGA3Q9Y5H0 932 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 PPP2R3BQ9Y5P8 575 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 CDY2AQ9Y6F7 541 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 CDY1Q9Y6F8 540 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 DLEC1Q9Y238 1755 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 TNRQ92752 1358 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 LRP5O75197 1615 aa4.9□□□□□ -1.62
SF3B1-207ENST00000468925 GOLGA8JA6NMD2 632 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PRR5-ARHGAP8B1AHC4 643 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 E7ESA3 106 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 F5H6K3 240 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 H0YAE9 185 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PSMD11O00231 422 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 EEF2KO00418 725 aaKnown RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 TP73O15350 636 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PHGDHO43175 533 aaKnown RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 HOXC11O43248 304 aaPredicted RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PAPSS1O43252 624 aaPredicted RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 FBXO24O75426 580 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 B3GALNT1O75752 331 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 SEC14L2O76054 403 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 TRIM16O95361 564 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms