RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 PPP6R3Q5H9R7 873 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-205ENST00000468338 PPM1JQ5JR12 505 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 KCNT1Q5JUK3 1230 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 TBC1D3GQ6DHY5 549 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 TBC1D3CQ6IPX1 549 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 IL27RAQ6UWB1 636 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 ERN2Q76MJ5 926 aaKnown RBP11.32□□□□□ -0.6
COL4A6-205ENST00000468338 GAS2L3Q86XJ1 694 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 TBC1D3Q8IZP1 549 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-205ENST00000468338 LZTR1Q8N653 840 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 NPWQ8N729 165 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 TC2NQ8N9U0 490 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 OR2I1PQ8NGU4 316 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 ZNF564Q8TBZ8 553 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-205ENST00000468338 SNX19Q92543 992 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 GTPBP2Q9BX10 602 aaKnown RBP11.32□□□□□ -0.6
COL4A6-205ENST00000468338 TM6SF2Q9BZW4 377 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 TRIM5Q9C035 493 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 ZWILCHQ9H900 591 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 NHEJ1Q9H9Q4 299 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-205ENST00000468338 DMTF1Q9Y222 760 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 TMEM131Q92545 1883 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 AKR1B15C9JRZ8 316 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-205ENST00000468338 J3KR12 359 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 WNT9AO14904 365 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 SIAH2O43255 324 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 AP1G1O43747 822 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 AKR1B10O60218 316 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 MTA2O94776 668 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 PROSCO94903 275 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 WNT1P04628 370 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 ADRB1P08588 477 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 MAN1A1P33908 653 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 CTSKP43235 329 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 PAPOLAP51003 745 aaKnown RBP11.31□□□□□ -0.6
COL4A6-205ENST00000468338 PSMA6P60900 246 aaKnown RBP11.31□□□□□ -0.6
COL4A6-205ENST00000468338 TCEAL1Q15170 157 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 TEAD4Q15561 434 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 SMTNL2Q2TAL5 461 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 HLA-BQ31612 363 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 MYLK3Q32MK0 819 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 UAP1L1Q3KQV9 507 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 ZNF805Q5CZA5 627 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 LEKR1Q6ZMV7 388 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 PRPF39Q86UA1 669 aaKnown RBP11.31□□□□□ -0.6
COL4A6-205ENST00000468338 GRIN3AQ8TCU5 1115 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 CTNNBL1Q8WYA6 563 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-205ENST00000468338 MRFAP1L1Q96HT8 127 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 PPP1R16AQ96I34 528 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 CELF6Q96J87 481 aaKnown RBP11.31□□□□□ -0.6
COL4A6-205ENST00000468338 CCDC42Q96M95 316 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 SLC6A18Q96N87 628 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 CSPG4P5Q96PW8 444 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 OSBPL1AQ9BXW6 950 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 CPEB1Q9BZB8 566 aaKnown RBP11.31□□□□□ -0.6
COL4A6-205ENST00000468338 PCDH18Q9HCL0 1135 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.31□□□□□ -0.6
COL4A6-205ENST00000468338 RCOR3Q9P2K3 495 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-205ENST00000468338 LHX3Q9UBR4 397 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 LCMT1Q9UIC8 334 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 ANKRD6Q9Y2G4 727 aa11.31□□□□□ -0.6
COL4A6-205ENST00000468338 TP53BP1Q12888 1972 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-205ENST00000468338 ARHGAP42A6NI28 874 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 H3BRJ5 948 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 AREL1O15033 823 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 DAPK3O43293 454 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 RNGTTO60942 597 aaKnown RBP11.3□□□□□ -0.6
COL4A6-205ENST00000468338 CER1O95813 267 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 ADRB3P13945 408 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 AMPD1P23109 780 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 CD38P28907 300 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 GKP32189 559 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 ARL4AP40617 200 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 CSNK1DP48730 415 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 DNA2P51530 1060 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 NEK3P51956 506 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 IL10RBQ08334 325 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 ZNF423Q2M1K9 1284 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 ZNF284Q2VY69 593 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 ATXN7L2Q5T6C5 722 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-205ENST00000468338 NAPEPLDQ6IQ20 393 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 PARS2Q7L3T8 475 aaKnown RBP11.3□□□□□ -0.6
COL4A6-205ENST00000468338 IQCHQ86VS3 1027 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 HORMAD1Q86X24 394 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 CPNE8Q86YQ8 564 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 TP53INP2Q8IXH6 220 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 MFSD2AQ8NA29 543 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 TMEM145Q8NBT3 493 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 RAB7BQ96AH8 199 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 GDAP1L1Q96MZ0 367 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 SAP130Q9H0E3 1048 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 DEF6Q9H4E7 631 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 GAREM1Q9H706 876 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 IL21RQ9HBE5 538 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 DYRK4Q9NR20 520 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 ETNK2Q9NVF9 386 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 CTTNBP2NLQ9P2B4 639 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 DKK3Q9UBP4 350 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 UBA2Q9UBT2 640 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-205ENST00000468338 INTUQ9ULD6 942 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms