RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 VPS36Q86VN1 386 aa24.79■■□□□ 1.56
PTCH1-210ENST00000468211 DNAAF5Q86Y56 855 aa24.79■■□□□ 1.56
PTCH1-210ENST00000468211 RBFAQ8N0V3 343 aa24.79■■□□□ 1.56
PTCH1-210ENST00000468211 UMODL1-AS1Q8N2C9 162 aa24.79■■□□□ 1.56
PTCH1-210ENST00000468211 AOPEPQ8N6M6 819 aa24.79■■□□□ 1.56
PTCH1-210ENST00000468211 DENND6BQ8NEG7 585 aa24.79■■□□□ 1.56
PTCH1-210ENST00000468211 MBNL1Q9NR56 388 aaKnown RBP24.79■■□□□ 1.56
PTCH1-210ENST00000468211 MFHAS1Q9Y4C4 1052 aa24.79■■□□□ 1.56
PTCH1-210ENST00000468211 IGSF6O95976 241 aa24.78■■□□□ 1.56
PTCH1-210ENST00000468211 FERP16591 822 aa24.78■■□□□ 1.56
PTCH1-210ENST00000468211 JUNDP17535 347 aa24.78■■□□□ 1.56
PTCH1-210ENST00000468211 ABCG1P45844 678 aa24.78■■□□□ 1.56
PTCH1-210ENST00000468211 DEFB133Q30KQ1 61 aa24.78■■□□□ 1.56
PTCH1-210ENST00000468211 DCUN1D2Q6PH85 259 aa24.78■■□□□ 1.56
PTCH1-210ENST00000468211 CASKIN2Q8WXE0 1202 aa24.78■■□□□ 1.56
PTCH1-210ENST00000468211 EPAS1Q99814 870 aa24.78■■□□□ 1.56
PTCH1-210ENST00000468211 WRAP53Q9BUR4 548 aaKnown RBP24.78■■□□□ 1.56
PTCH1-210ENST00000468211 LRP4O75096 1905 aa24.77■■□□□ 1.56
PTCH1-210ENST00000468211 ANKRD62A6NC57 917 aa24.77■■□□□ 1.56
PTCH1-210ENST00000468211 TMCO5BA8MYB1 307 aa24.77■■□□□ 1.56
PTCH1-210ENST00000468211 AQP9O43315 295 aa24.77■■□□□ 1.56
PTCH1-210ENST00000468211 PIGNO95427 931 aa24.77■■□□□ 1.56
PTCH1-210ENST00000468211 CA9Q16790 459 aa24.77■■□□□ 1.56
PTCH1-210ENST00000468211 PARP15Q460N3 678 aa24.77■■□□□ 1.56
PTCH1-210ENST00000468211 ARFGAP1Q8N6T3 406 aa24.77■■□□□ 1.56
PTCH1-210ENST00000468211 TP53I13Q8NBR0 393 aaPredicted RBP24.77■■□□□ 1.56
PTCH1-210ENST00000468211 LMX1AQ8TE12 382 aa24.77■■□□□ 1.56
PTCH1-210ENST00000468211 ARHGEF26Q96DR7 871 aa24.77■■□□□ 1.56
PTCH1-210ENST00000468211 DUSP23Q9BVJ7 150 aa24.77■■□□□ 1.56
PTCH1-210ENST00000468211 LRRC19Q9H756 370 aa24.77■■□□□ 1.56
PTCH1-210ENST00000468211 CATSPERBQ9H7T0 1116 aa24.77■■□□□ 1.56
PTCH1-210ENST00000468211 PDFQ9HBH1 243 aa24.77■■□□□ 1.56
PTCH1-210ENST00000468211 DKK3Q9UBP4 350 aa24.77■■□□□ 1.56
PTCH1-210ENST00000468211 CSNK1G3Q9Y6M4 447 aa24.77■■□□□ 1.56
PTCH1-210ENST00000468211 KIF26BQ2KJY2 2108 aa24.76■■□□□ 1.55
PTCH1-210ENST00000468211 H3BM21 787 aa24.76■■□□□ 1.55
PTCH1-210ENST00000468211 J3KR12 359 aa24.76■■□□□ 1.55
PTCH1-210ENST00000468211 ATMINO43313 823 aaPredicted RBP24.76■■□□□ 1.55
PTCH1-210ENST00000468211 GCATO75600 419 aa24.76■■□□□ 1.55
PTCH1-210ENST00000468211 TM7SF2O76062 418 aa24.76■■□□□ 1.55
PTCH1-210ENST00000468211 RAD51Q06609 339 aa24.76■■□□□ 1.55
PTCH1-210ENST00000468211 MAMLD1Q13495 774 aa24.76■■□□□ 1.55
PTCH1-210ENST00000468211 CDKN3Q16667 212 aa24.76■■□□□ 1.55
PTCH1-210ENST00000468211 KLHL40Q2TBA0 621 aa24.76■■□□□ 1.55
PTCH1-210ENST00000468211 ZCCHC8Q6NZY4 707 aaKnown RBP24.76■■□□□ 1.55
PTCH1-210ENST00000468211 SNIP1Q8TAD8 396 aaKnown RBP24.76■■□□□ 1.55
PTCH1-210ENST00000468211 IFI44Q8TCB0 444 aa24.76■■□□□ 1.55
PTCH1-210ENST00000468211 COQ6Q9Y2Z9 468 aa24.76■■□□□ 1.55
PTCH1-210ENST00000468211 RAI2Q9Y5P3 530 aa24.76■■□□□ 1.55
PTCH1-210ENST00000468211 GP1BAP07359 652 aa24.75■■□□□ 1.55
PTCH1-210ENST00000468211 TNFAIP3P21580 790 aa24.75■■□□□ 1.55
PTCH1-210ENST00000468211 AIF1P55008 147 aa24.75■■□□□ 1.55
PTCH1-210ENST00000468211 TYRO3Q06418 890 aa24.75■■□□□ 1.55
PTCH1-210ENST00000468211 C1orf61Q13536 156 aa24.75■■□□□ 1.55
PTCH1-210ENST00000468211 CCDC183Q5T5S1 534 aa24.75■■□□□ 1.55
PTCH1-210ENST00000468211 GUSBP11Q6P575 273 aa24.75■■□□□ 1.55
PTCH1-210ENST00000468211 CXorf40AQ8TE69 158 aa24.75■■□□□ 1.55
PTCH1-210ENST00000468211 FGF11Q92914 225 aa24.75■■□□□ 1.55
PTCH1-210ENST00000468211 CELF6Q96J87 481 aaKnown RBP24.75■■□□□ 1.55
PTCH1-210ENST00000468211 PEBP4Q96S96 227 aa24.75■■□□□ 1.55
PTCH1-210ENST00000468211 CPEB1Q9BZB8 566 aaKnown RBP24.75■■□□□ 1.55
PTCH1-210ENST00000468211 UBA2Q9UBT2 640 aaPredicted RBP24.75■■□□□ 1.55
PTCH1-210ENST00000468211 CPED1A4D0V7 1026 aa24.74■■□□□ 1.55
PTCH1-210ENST00000468211 CASC3O15234 703 aaKnown RBP24.74■■□□□ 1.55
PTCH1-210ENST00000468211 FGF10O15520 208 aaPredicted RBP24.74■■□□□ 1.55
PTCH1-210ENST00000468211 BUB1BO60566 1050 aaPredicted RBP24.74■■□□□ 1.55
PTCH1-210ENST00000468211 TGM2P21980 687 aa24.74■■□□□ 1.55
PTCH1-210ENST00000468211 DUSP3P51452 185 aaPredicted RBP24.74■■□□□ 1.55
PTCH1-210ENST00000468211 THOP1P52888 689 aa24.74■■□□□ 1.55
PTCH1-210ENST00000468211 TPI1P60174 286 aa24.74■■□□□ 1.55
PTCH1-210ENST00000468211 TBC1D25Q3MII6 688 aa24.74■■□□□ 1.55
PTCH1-210ENST00000468211 E4F1Q66K89 784 aaPredicted RBP24.74■■□□□ 1.55
PTCH1-210ENST00000468211 NYAP1Q6ZVC0 841 aa24.74■■□□□ 1.55
PTCH1-210ENST00000468211 ZSWIM9Q86XI8 627 aa24.74■■□□□ 1.55
PTCH1-210ENST00000468211 PHACTR4Q8IZ21 702 aa24.74■■□□□ 1.55
PTCH1-210ENST00000468211 LRRC61Q9BV99 259 aa24.74■■□□□ 1.55
PTCH1-210ENST00000468211 TRIM7Q9C029 511 aa24.74■■□□□ 1.55
PTCH1-210ENST00000468211 SLC39A8Q9C0K1 460 aa24.74■■□□□ 1.55
PTCH1-210ENST00000468211 USP29Q9HBJ7 922 aa24.74■■□□□ 1.55
PTCH1-210ENST00000468211 RTN4Q9NQC3 1192 aaKnown RBP24.74■■□□□ 1.55
PTCH1-210ENST00000468211 APOBEC3BQ9UH17 382 aaKnown RBP24.74■■□□□ 1.55
PTCH1-210ENST00000468211 AP4E1Q9UPM8 1137 aa24.74■■□□□ 1.55
PTCH1-210ENST00000468211 LRRC53A6NM62 1247 aa24.73■■□□□ 1.55
PTCH1-210ENST00000468211 CSO75390 466 aaKnown RBP24.73■■□□□ 1.55
PTCH1-210ENST00000468211 MPOP05164 745 aa24.73■■□□□ 1.55
PTCH1-210ENST00000468211 PSMA2P25787 234 aa24.73■■□□□ 1.55
PTCH1-210ENST00000468211 EIF4A3P38919 411 aaKnown RBP24.73■■□□□ 1.55
PTCH1-210ENST00000468211 RGRP47804 291 aa24.73■■□□□ 1.55
PTCH1-210ENST00000468211 IRF4Q15306 451 aa24.73■■□□□ 1.55
PTCH1-210ENST00000468211 TMEM52BQ4KMG9 183 aa24.73■■□□□ 1.55
PTCH1-210ENST00000468211 PLEKHA7Q6IQ23 1121 aa24.73■■□□□ 1.55
PTCH1-210ENST00000468211 MAPK15Q8TD08 544 aa24.73■■□□□ 1.55
PTCH1-210ENST00000468211 VCPIP1Q96JH7 1222 aa24.73■■□□□ 1.55
PTCH1-210ENST00000468211 CLPBQ9H078 707 aa24.73■■□□□ 1.55
PTCH1-210ENST00000468211 DHX35Q9H5Z1 703 aaKnown RBP24.73■■□□□ 1.55
PTCH1-210ENST00000468211 PRORYQ9H606 182 aa24.73■■□□□ 1.55
PTCH1-210ENST00000468211 TMEM63CQ9P1W3 806 aa24.73■■□□□ 1.55
PTCH1-210ENST00000468211 PCSK1NQ9UHG2 260 aa24.73■■□□□ 1.55
PTCH1-210ENST00000468211 SALL4Q9UJQ4 1053 aa24.73■■□□□ 1.55
PTCH1-210ENST00000468211 TSPAN11A1L157 253 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms