RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 FBXO4Q9UKT5 387 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 AAR2Q9Y312 384 aaKnown RBP15.35■□□□□ 0.05
NPHP4-205ENST00000466897 ARIH1Q9Y4X5 557 aaPredicted RBP15.35■□□□□ 0.05
NPHP4-205ENST00000466897 FANCMQ8IYD8 2048 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 GOLGA6CA6NDK9 693 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 GOLGA6BA6NDN3 693 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 ERI2A8K979 691 aaKnown RBP15.34■□□□□ 0.05
NPHP4-205ENST00000466897 LAMTOR5O43504 91 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 FZD6O60353 706 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 GJB3O75712 270 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 IL1BP01584 269 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 EPOP01588 193 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 DNTTP04053 509 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 GOLGA6DP0CG33 693 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 PSMB4P28070 264 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 RPL22P35268 128 aaKnown RBP15.34■□□□□ 0.05
NPHP4-205ENST00000466897 CD86P42081 329 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 PTGIRP43119 386 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 SUOXP51687 545 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 GEMP55040 296 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 RPL26P61254 145 aaKnown RBP15.34■□□□□ 0.05
NPHP4-205ENST00000466897 DR1Q01658 176 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 CCDC15Q0P6D6 951 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 PTK6Q13882 451 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 PRPSAP1Q14558 356 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 IHHQ14623 411 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 TTC31Q49AM3 519 aaPredicted RBP15.34■□□□□ 0.05
NPHP4-205ENST00000466897 TMEM31Q5JXX7 168 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 DNTTIP2Q5QJE6 756 aaKnown RBP15.34■□□□□ 0.05
NPHP4-205ENST00000466897 MAATS1Q7Z4T9 603 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 KBTBD6Q86V97 674 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 KLHL7Q8IXQ5 586 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 GLIS1Q8NBF1 620 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 MDGA1Q8NFP4 955 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 GRIN3AQ8TCU5 1115 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 NSMCE3Q96MG7 304 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 HHIPQ96QV1 700 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 GORASP1Q9BQQ3 440 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 HDAC8Q9BY41 377 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 PABPC3Q9H361 631 aaKnown RBP15.34■□□□□ 0.05
NPHP4-205ENST00000466897 POLR3BQ9NW08 1133 aaPredicted RBP15.34■□□□□ 0.05
NPHP4-205ENST00000466897 GOLGA6AQ9NYA3 693 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 USP36Q9P275 1121 aaKnown RBP15.34■□□□□ 0.05
NPHP4-205ENST00000466897 SARDHQ9UL12 918 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 FZD4Q9ULV1 537 aa15.34■□□□□ 0.05
NPHP4-205ENST00000466897 RPL26L1Q9UNX3 145 aaKnown RBP15.34■□□□□ 0.05
NPHP4-205ENST00000466897 CEP192Q8TEP8 1941 aa15.33■□□□□ 0.05
NPHP4-205ENST00000466897 CTAGE15A4D2H0 777 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 PSMD3O43242 534 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 SLC7A4O43246 635 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 PIGNO95427 931 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 METTL18O95568 372 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 KRT14P02533 472 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 UGT2B4P06133 528 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 CTAGE8P0CG41 777 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 GKP32189 559 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 SLC8A1P32418 973 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 PSMD8P48556 350 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 C2orf54Q08AI8 447 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 SEMA5AQ13591 1074 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 KCTD11Q693B1 232 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 ANO7Q6IWH7 933 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 KDELC1Q6UW63 502 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 CTAGE6Q86UF2 777 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 CAMK1DQ8IU85 385 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 CTAGE4Q8IX94 777 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 MAML2Q8IZL2 1156 aaPredicted RBP15.33■□□□□ 0.04
NPHP4-205ENST00000466897 HMGB4Q8WW32 186 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 OXNAD1Q96HP4 312 aaPredicted RBP15.33■□□□□ 0.04
NPHP4-205ENST00000466897 FEM1CQ96JP0 617 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 RBM15Q96T37 977 aaKnown RBP eCLIP15.33■□□□□ 0.04
NPHP4-205ENST00000466897 KRT12Q99456 494 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 FAM126AQ9BYI3 521 aaPredicted RBP15.33■□□□□ 0.04
NPHP4-205ENST00000466897 DYRK4Q9NR20 520 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 EIF2B3Q9NR50 452 aaKnown RBP15.33■□□□□ 0.04
NPHP4-205ENST00000466897 RAI2Q9Y5P3 530 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 LRRK1Q38SD2 2015 aa15.33■□□□□ 0.04
NPHP4-205ENST00000466897 TTC24A2A3L6 582 aaPredicted RBP15.32■□□□□ 0.04
NPHP4-205ENST00000466897 FAM86C2PA6NEL3 165 aa15.32■□□□□ 0.04
NPHP4-205ENST00000466897 FAM187AA6NFU0 413 aa15.32■□□□□ 0.04
NPHP4-205ENST00000466897 KPNA3O00505 521 aaPredicted RBP15.32■□□□□ 0.04
NPHP4-205ENST00000466897 MID1O15344 667 aa15.32■□□□□ 0.04
NPHP4-205ENST00000466897 ZNF217O75362 1048 aa15.32■□□□□ 0.04
NPHP4-205ENST00000466897 PGLSO95336 258 aa15.32■□□□□ 0.04
NPHP4-205ENST00000466897 MT-CYBP00156 380 aaPredicted RBP15.32■□□□□ 0.04
NPHP4-205ENST00000466897 ZSCAN5DPP0CG00 497 aa15.32■□□□□ 0.04
NPHP4-205ENST00000466897 ACADMP11310 421 aa15.32■□□□□ 0.04
NPHP4-205ENST00000466897 ETS1P14921 441 aa15.32■□□□□ 0.04
NPHP4-205ENST00000466897 DRD3P35462 400 aa15.32■□□□□ 0.04
NPHP4-205ENST00000466897 MAGEA6P43360 314 aa15.32■□□□□ 0.04
NPHP4-205ENST00000466897 POLR2LP62875 67 aaKnown RBP15.32■□□□□ 0.04
NPHP4-205ENST00000466897 TRAF2Q12933 501 aa15.32■□□□□ 0.04
NPHP4-205ENST00000466897 PPP1R7Q15435 360 aa15.32■□□□□ 0.04
NPHP4-205ENST00000466897 ZNF528Q3MIS6 628 aa15.32■□□□□ 0.04
NPHP4-205ENST00000466897 ARMC12Q5T9G4 340 aa15.32■□□□□ 0.04
NPHP4-205ENST00000466897 JAMLQ86YT9 394 aa15.32■□□□□ 0.04
NPHP4-205ENST00000466897 MMGT1Q8N4V1 131 aa15.32■□□□□ 0.04
NPHP4-205ENST00000466897 AADATQ8N5Z0 425 aa15.32■□□□□ 0.04
NPHP4-205ENST00000466897 SPATA22Q8NHS9 363 aa15.32■□□□□ 0.04
NPHP4-205ENST00000466897 NELL1Q92832 810 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms