RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 CPEB1Q9BZB8 566 aaKnown RBP14.05□□□□□ -0.16
UBA3-209ENST00000466763 POLR1EQ9GZS1 481 aaKnown RBP14.05□□□□□ -0.16
UBA3-209ENST00000466763 ARRDC1-AS1Q9H2J1 176 aa14.05□□□□□ -0.16
UBA3-209ENST00000466763 SUV39H2Q9H5I1 410 aa14.05□□□□□ -0.16
UBA3-209ENST00000466763 NOD2Q9HC29 1040 aa14.05□□□□□ -0.16
UBA3-209ENST00000466763 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.04□□□□□ -0.16
UBA3-209ENST00000466763 METTL12A8MUP2 240 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 SLC7A4O43246 635 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 GFRA3O60609 400 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 HLA-DQB2P05538 268 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 RETP07949 1114 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 ADRB3P13945 408 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 ITPKAP23677 461 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 ADPRHP54922 357 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 AP1S1P61966 158 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 DSC2Q02487 901 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 ZBTB17Q13105 803 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 LRRC73Q5JTD7 316 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 WDR45BQ5MNZ6 344 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 PIP5KL1Q5T9C9 394 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 AGBL4Q5VU57 503 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 KIAA0895LQ68EN5 471 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 DARS2Q6PI48 645 aaKnown RBP14.04□□□□□ -0.16
UBA3-209ENST00000466763 DCLK2Q8N568 766 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 TTC13Q8NBP0 860 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 CADM4Q8NFZ8 388 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 OR2T34Q8NGX1 318 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 ZNF419Q96HQ0 510 aaPredicted RBP14.04□□□□□ -0.16
UBA3-209ENST00000466763 LOXL4Q96JB6 756 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 AGAP3Q96P47 875 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 TUBGCP5Q96RT8 1024 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 MGME1Q9BQP7 344 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 TLR10Q9BXR5 811 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 HDAC8Q9BY41 377 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 C10orf88Q9H8K7 445 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 PCDHGC4Q9Y5F7 938 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 ATXN2Q99700 1313 aaKnown RBP14.04□□□□□ -0.16
UBA3-209ENST00000466763 WDFY4Q6ZS81 3184 aa14.04□□□□□ -0.16
UBA3-209ENST00000466763 GPR179Q6PRD1 2367 aa14.03□□□□□ -0.16
UBA3-209ENST00000466763 TCRBV7S2A1N4TA0A589 114 aa14.03□□□□□ -0.16
UBA3-209ENST00000466763 HACD1B0YJ81 288 aa14.03□□□□□ -0.16
UBA3-209ENST00000466763 PLRG1O43660 514 aaKnown RBP14.03□□□□□ -0.16
UBA3-209ENST00000466763 CEP104O60308 925 aa14.03□□□□□ -0.16
UBA3-209ENST00000466763 RNGTTO60942 597 aaKnown RBP14.03□□□□□ -0.16
UBA3-209ENST00000466763 EPN2O95208 641 aa14.03□□□□□ -0.16
UBA3-209ENST00000466763 RBP3P10745 1247 aa14.03□□□□□ -0.16
UBA3-209ENST00000466763 MAT2AP31153 395 aaKnown RBP14.03□□□□□ -0.16
UBA3-209ENST00000466763 CXCR5P32302 372 aa14.03□□□□□ -0.16
UBA3-209ENST00000466763 IFI35P80217 286 aaPredicted RBP14.03□□□□□ -0.16
UBA3-209ENST00000466763 PRKD1Q15139 912 aaPredicted RBP14.03□□□□□ -0.16
UBA3-209ENST00000466763 NOMO1Q15155 1222 aa14.03□□□□□ -0.16
UBA3-209ENST00000466763 SLC45A4Q5BKX6 768 aa14.03□□□□□ -0.16
UBA3-209ENST00000466763 SPDYCQ5MJ68 293 aa14.03□□□□□ -0.16
UBA3-209ENST00000466763 CDKL3Q8IVW4 592 aaPredicted RBP14.03□□□□□ -0.16
UBA3-209ENST00000466763 RUBCNQ92622 972 aa14.03□□□□□ -0.16
UBA3-209ENST00000466763 KLK6Q92876 244 aa14.03□□□□□ -0.16
UBA3-209ENST00000466763 FATE1Q969F0 183 aa14.03□□□□□ -0.16
UBA3-209ENST00000466763 ZNF641Q96N77 438 aaPredicted RBP14.03□□□□□ -0.16
UBA3-209ENST00000466763 QKIQ96PU8 341 aaKnown RBP eCLIP14.03□□□□□ -0.161e-6■■■■□ 23.1
UBA3-209ENST00000466763 IL12RB2Q99665 862 aa14.03□□□□□ -0.16
UBA3-209ENST00000466763 FERMT1Q9BQL6 677 aa14.03□□□□□ -0.16
UBA3-209ENST00000466763 CARD9Q9H257 536 aa14.03□□□□□ -0.16
UBA3-209ENST00000466763 KLHL8Q9P2G9 620 aaPredicted RBP14.03□□□□□ -0.16
UBA3-209ENST00000466763 AMACRQ9UHK6 382 aa14.03□□□□□ -0.16
UBA3-209ENST00000466763 EIF2B4Q9UI10 523 aaKnown RBP14.03□□□□□ -0.16
UBA3-209ENST00000466763 JRKLQ9Y4A0 524 aa14.03□□□□□ -0.16
UBA3-209ENST00000466763 BCLAF3A2AJT9 711 aaKnown RBP14.02□□□□□ -0.17
UBA3-209ENST00000466763 F5H423 210 aaPredicted RBP14.02□□□□□ -0.17
UBA3-209ENST00000466763 MTSS1O43312 755 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 PRKCGP05129 697 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 TIMP2P16035 220 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 ITIH2P19823 946 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 CR2P20023 1033 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 PTPN3P26045 913 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 RBL1P28749 1068 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 PLA2G5P39877 138 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 MPLP40238 635 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 ABL2P42684 1182 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 TAS2R38P59533 333 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 SPEM2Q0P670 501 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 XRCC4Q13426 336 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 PID1Q7Z2X4 250 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 ALYREFQ86V81 257 aaKnown RBP14.02□□□□□ -0.17
UBA3-209ENST00000466763 SLC13A5Q86YT5 568 aaPredicted RBP14.02□□□□□ -0.17
UBA3-209ENST00000466763 HTR3CQ8WXA8 447 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 RAB7BQ96AH8 199 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 BIRC7Q96CA5 298 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 NSMCE3Q96MG7 304 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 PCED1AQ9H1Q7 454 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 KDM4CQ9H3R0 1056 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 SMOC1Q9H4F8 434 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 DKK3Q9UBP4 350 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 ITM2BQ9Y287 266 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 ATP8A1Q9Y2Q0 1164 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 DOCK9Q9BZ29 2069 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 TRPM6Q9BX84 2022 aa14.02□□□□□ -0.17
UBA3-209ENST00000466763 A0A1W2PQU0 124 aa14.01□□□□□ -0.17
UBA3-209ENST00000466763 UPK3BL1B0FP48 263 aa14.01□□□□□ -0.17
UBA3-209ENST00000466763 UPK3BL2E5RIL1 263 aa14.01□□□□□ -0.17
UBA3-209ENST00000466763 KCNN4O15554 427 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms