RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 PIGKQ92643 395 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 RAB7BQ96AH8 199 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 ECHDC3Q96DC8 303 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 ALS2CR12Q96Q35 445 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 HEMGNQ9BXL5 484 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 SUV39H2Q9H5I1 410 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 ATP13A3Q9H7F0 1226 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 VPS45Q9NRW7 570 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 SEMA4GQ9NTN9 838 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 FADS3Q9Y5Q0 445 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 PLXNA2O75051 1894 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 TRAFD1O14545 582 aaPredicted RBP20.54■□□□□ 0.88
SKA3-205ENST00000465471 SERPINA4P29622 427 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 SCNN1BP51168 640 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 MAXP61244 160 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 ZBTB17Q13105 803 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 NEK5Q6P3R8 708 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 FBXL19Q6PCT2 694 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 ZSWIM9Q86XI8 627 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 CAMK1DQ8IU85 385 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 REXO1L1PQ8IX06 675 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 TRIM58Q8NG06 486 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 P3H4Q92791 437 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 HINFPQ9BQA5 517 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 POLR1EQ9GZS1 481 aaKnown RBP20.54■□□□□ 0.88
SKA3-205ENST00000465471 NOD2Q9HC29 1040 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 NT5MQ9NPB1 228 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 ATP8A1Q9Y2Q0 1164 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 PI4KAP42356 2102 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 CACNA1EQ15878 2313 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 PCDH15Q96QU1 1955 aa20.54■□□□□ 0.88
SKA3-205ENST00000465471 TBC1D3DA0A087WVF3 549 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 TBC1D3IA0A087WXS9 549 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 TBC1D3EA0A087X179 549 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 TBC1D3KA0A087X1G2 549 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.53■□□□□ 0.88
SKA3-205ENST00000465471 TTC24A2A3L6 582 aaPredicted RBP20.53■□□□□ 0.88
SKA3-205ENST00000465471 TBC1D3FA6NER0 549 aaPredicted RBP20.53■□□□□ 0.88
SKA3-205ENST00000465471 FAM47DPA6NHR8 397 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 TBC1D3LB9A6J9 549 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 KCNK1O00180 336 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 AREL1O15033 823 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 HTRA2O43464 458 aaPredicted RBP20.53■□□□□ 0.88
SKA3-205ENST00000465471 FSBPO95073 299 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 HLA-DQB2P05538 268 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 TBC1D3HP0C7X1 549 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 CD27P26842 260 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 MAOBP27338 520 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 CCDC173Q0VFZ6 552 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 KLF1Q13351 362 aaPredicted RBP20.53■□□□□ 0.88
SKA3-205ENST00000465471 ZNF211Q13398 564 aaPredicted RBP20.53■□□□□ 0.88
SKA3-205ENST00000465471 NOMO1Q15155 1222 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 CCDC6Q16204 474 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 TBC1D3GQ6DHY5 549 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 TBC1D3CQ6IPX1 549 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 BRAT1Q6PJG6 821 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 TBC1D3Q8IZP1 549 aaPredicted RBP20.53■□□□□ 0.88
SKA3-205ENST00000465471 GPR161Q8N6U8 529 aaKnown RBP20.53■□□□□ 0.88
SKA3-205ENST00000465471 CNTD1Q8N815 330 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 QKIQ96PU8 341 aaKnown RBP eCLIP20.53■□□□□ 0.88
SKA3-205ENST00000465471 SMOC1Q9H4F8 434 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 EBF2Q9HAK2 575 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 RBM22Q9NW64 420 aaKnown RBP eCLIP20.53■□□□□ 0.885e-6■■□□□ 13.6
SKA3-205ENST00000465471 EIF2B4Q9UI10 523 aaKnown RBP20.53■□□□□ 0.88
SKA3-205ENST00000465471 SLCO1B1Q9Y6L6 691 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 LAMA1P25391 3075 aa20.53■□□□□ 0.88
SKA3-205ENST00000465471 PTPRZ1P23471 2315 aaPredicted RBP20.53■□□□□ 0.88
SKA3-205ENST00000465471 A0A1W2PPC4 97 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 SOCS5O75159 536 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 TIMP2P16035 220 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 CETN2P41208 172 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 SUOXP51687 545 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 BCL2L1Q07817 233 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 AP1B1Q10567 949 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 XRCC4Q13426 336 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 IHHQ14623 411 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 TMEM259Q4ZIN3 620 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 SLC23A3Q6PIS1 610 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 RABEPKQ7Z6M1 372 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 RGL4Q8IZJ4 473 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 CEP76Q8TAP6 659 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 ARRDC2Q8TBH0 407 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 HAUS1Q96CS2 278 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 CAPN10Q9HC96 672 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 SCUBE2Q9NQ36 999 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 SUSD2Q9UGT4 822 aa20.52■□□□□ 0.88
SKA3-205ENST00000465471 DOCK9Q9BZ29 2069 aa20.52■□□□□ 0.87
SKA3-205ENST00000465471 HACD1B0YJ81 288 aa20.51■□□□□ 0.87
SKA3-205ENST00000465471 PATE3B3GLJ2 98 aa20.51■□□□□ 0.87
SKA3-205ENST00000465471 RNGTTO60942 597 aaKnown RBP20.51■□□□□ 0.87
SKA3-205ENST00000465471 TJP3O95049 919 aa20.51■□□□□ 0.87
SKA3-205ENST00000465471 JCHAINP01591 159 aa20.51■□□□□ 0.87
SKA3-205ENST00000465471 CES1P23141 567 aa20.51■□□□□ 0.87
SKA3-205ENST00000465471 UGP2Q16851 508 aa20.51■□□□□ 0.87
SKA3-205ENST00000465471 PRR23CQ6ZRP0 262 aa20.51■□□□□ 0.87
SKA3-205ENST00000465471 HORMAD1Q86X24 394 aa20.51■□□□□ 0.87
SKA3-205ENST00000465471 ACTL9Q8TC94 416 aa20.51■□□□□ 0.87
SKA3-205ENST00000465471 TFB1MQ8WVM0 346 aaKnown RBP20.51■□□□□ 0.87
SKA3-205ENST00000465471 SNX19Q92543 992 aa20.51■□□□□ 0.87
SKA3-205ENST00000465471 SEMA3CQ99985 751 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms