RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PTPN13Q12923 2485 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 CKAP5Q14008 2032 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 EEF2KO00418 725 aaKnown RBP14.09□□□□□ -0.15
HDAC6-215ENST00000465457 PPP1R12AO14974 1030 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-215ENST00000465457 TLX3O43711 291 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-215ENST00000465457 TTC4O95801 387 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 IGLV3-25P01717 112 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 SLC2A3P11169 496 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 TSHRP16473 764 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 SERPINB6P35237 376 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 RPL22P35268 128 aaKnown RBP14.09□□□□□ -0.15
HDAC6-215ENST00000465457 ARL4CP56559 192 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 CBLBQ13191 982 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 PAFAH1B3Q15102 231 aaKnown RBP14.09□□□□□ -0.15
HDAC6-215ENST00000465457 PDK1Q15118 436 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 RFX8Q6ZV50 586 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 FAM71DQ8N9W8 422 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 DQX1Q8TE96 717 aaKnown RBP14.09□□□□□ -0.15
HDAC6-215ENST00000465457 NDRG1Q92597 394 aaKnown RBP14.09□□□□□ -0.15
HDAC6-215ENST00000465457 PGM2Q96G03 612 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 SPATA17Q96L03 361 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 SERPINB11Q96P15 392 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 RBM15Q96T37 977 aaKnown RBP eCLIP14.09□□□□□ -0.15
HDAC6-215ENST00000465457 KLC2Q9H0B6 622 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 OSBPL2Q9H1P3 480 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 CDC42EP4Q9H3Q1 356 aaKnown RBP14.09□□□□□ -0.15
HDAC6-215ENST00000465457 PRORYQ9H606 182 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 WDCPQ9H6R7 721 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 TM7SF3Q9NS93 570 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 OLA1Q9NTK5 396 aaKnown RBP14.09□□□□□ -0.15
HDAC6-215ENST00000465457 TRPM5Q9NZQ8 1165 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 SAE1Q9UBE0 346 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-215ENST00000465457 HEY1Q9Y5J3 304 aa14.09□□□□□ -0.15
HDAC6-215ENST00000465457 FAM92AA1XBS5 289 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 IRAK2O43187 625 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 MTSS1O43312 755 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 TCEA3O75764 348 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 MBL2P11226 248 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-215ENST00000465457 GOT1P17174 413 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 ATP5DP30049 168 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 NTSR1P30989 418 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 TPI1P60174 286 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 DPYSQ14117 519 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 HIF1AQ16665 826 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 KRT71Q3SY84 523 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 C6orf118Q5T5N4 469 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 NCBP2-AS2Q69YL0 99 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 MSANTD2Q6P1R3 559 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 KIAA1324Q6UXG2 1013 aaKnown RBP14.08□□□□□ -0.16
HDAC6-215ENST00000465457 DENND5BQ6ZUT9 1274 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 ZNF605Q86T29 641 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 TAC4Q86UU9 113 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 ZC3H18Q86VM9 953 aaKnown RBP14.08□□□□□ -0.16
HDAC6-215ENST00000465457 UNC45BQ8IWX7 931 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 BBS7Q8IWZ6 715 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 PRCCQ92733 491 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-215ENST00000465457 MRGPRX1Q96LB2 322 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 OLFM3Q96PB7 478 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 HAPLN3Q96S86 360 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 MIR1-1HGQ9H1L0 117 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 EPB41L4BQ9H329 900 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 CLIC5Q9NZA1 410 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 IL37Q9NZH6 218 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 SUSD2Q9UGT4 822 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 ADAM21Q9UKJ8 722 aa14.08□□□□□ -0.16
HDAC6-215ENST00000465457 SYNJ2BP-COX16A0A087WUM0 186 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 C5orf60A6NFR6 353 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 MEI4A8MW99 385 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-215ENST00000465457 WASH3PC4AMC7 463 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 PLK4O00444 970 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 KCNN4O15554 427 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 NDUFS2O75306 463 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 GCATO75600 419 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 ZSCAN5DPP0CG00 497 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 MX2P20592 715 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 CCR1P32246 355 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 CHKAP35790 457 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 MAGEA6P43360 314 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 GDF10P55107 478 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 IFRD2Q12894 506 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-215ENST00000465457 SLC29A2Q14542 456 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 TERF2Q15554 542 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 HLA-BQ31612 363 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 DHRS13Q6UX07 377 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 NPNTQ6UXI9 565 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 TMEM25Q86YD3 366 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 CHPFQ8IZ52 775 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 PDIK1LQ8N165 341 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 NAT8LQ8N9F0 302 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 GLIS1Q8NBF1 620 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 TFB1MQ8WVM0 346 aaKnown RBP14.07□□□□□ -0.16
HDAC6-215ENST00000465457 EDEM1Q92611 657 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 RNF34Q969K3 372 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 FCRL3Q96P31 734 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-215ENST00000465457 CDK5RAP1Q96SZ6 601 aaKnown RBP14.07□□□□□ -0.16
HDAC6-215ENST00000465457 TTLL2Q9BWV7 592 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 USP29Q9HBJ7 922 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 ARHGEF38Q9NXL2 777 aa14.07□□□□□ -0.16
HDAC6-215ENST00000465457 DONSONQ9NYP3 566 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms