RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 SNRNP27Q8WVK2 155 aaKnown RBP22.93■■□□□ 1.26
USP4-208ENST00000464168 CENPIQ92674 756 aaPredicted RBP22.93■■□□□ 1.26
USP4-208ENST00000464168 TBATAQ96M53 351 aa22.93■■□□□ 1.26
USP4-208ENST00000464168 SAMSN1Q9NSI8 373 aaKnown RBP22.93■■□□□ 1.26
USP4-208ENST00000464168 CHD5Q8TDI0 1954 aa22.92■■□□□ 1.26
USP4-208ENST00000464168 COL27A1Q8IZC6 1860 aaPredicted RBP22.92■■□□□ 1.26
USP4-208ENST00000464168 PMS2P1A4D2B8 440 aa22.92■■□□□ 1.26
USP4-208ENST00000464168 KDELR3O43731 214 aa22.92■■□□□ 1.26
USP4-208ENST00000464168 MMP20O60882 483 aa22.92■■□□□ 1.26
USP4-208ENST00000464168 TCEA3O75764 348 aa22.92■■□□□ 1.26
USP4-208ENST00000464168 GJB6O95452 261 aa22.92■■□□□ 1.26
USP4-208ENST00000464168 ITIH2P19823 946 aa22.92■■□□□ 1.26
USP4-208ENST00000464168 PTPN9P43378 593 aa22.92■■□□□ 1.26
USP4-208ENST00000464168 YPEL5P62699 121 aa22.92■■□□□ 1.26
USP4-208ENST00000464168 C1QBPQ07021 282 aaKnown RBP22.92■■□□□ 1.26
USP4-208ENST00000464168 STRADAQ7RTN6 431 aa22.92■■□□□ 1.26
USP4-208ENST00000464168 ZNF677Q86XU0 584 aa22.92■■□□□ 1.26
USP4-208ENST00000464168 CCDC185Q8N715 623 aa22.92■■□□□ 1.26
USP4-208ENST00000464168 SLC30A5Q8TAD4 765 aa22.92■■□□□ 1.26
USP4-208ENST00000464168 TBC1D31Q96DN5 1066 aa22.92■■□□□ 1.26
USP4-208ENST00000464168 LRRC61Q9BV99 259 aa22.92■■□□□ 1.26
USP4-208ENST00000464168 CLPBQ9H078 707 aa22.92■■□□□ 1.26
USP4-208ENST00000464168 NOL6Q9H6R4 1146 aaKnown RBP22.92■■□□□ 1.26
USP4-208ENST00000464168 MBNL1Q9NR56 388 aaKnown RBP22.92■■□□□ 1.26
USP4-208ENST00000464168 PCDHGA8Q9Y5G5 932 aa22.92■■□□□ 1.26
USP4-208ENST00000464168 YY2O15391 372 aa22.91■■□□□ 1.26
USP4-208ENST00000464168 GFPT2O94808 682 aa22.91■■□□□ 1.26
USP4-208ENST00000464168 RPIAP49247 311 aa22.91■■□□□ 1.26
USP4-208ENST00000464168 HDAC4P56524 1084 aa22.91■■□□□ 1.26
USP4-208ENST00000464168 FMO1Q01740 532 aa22.91■■□□□ 1.26
USP4-208ENST00000464168 CDR2Q01850 454 aa22.91■■□□□ 1.26
USP4-208ENST00000464168 VAC14Q08AM6 782 aa22.91■■□□□ 1.26
USP4-208ENST00000464168 TCP11X2Q5H9J9 407 aa22.91■■□□□ 1.26
USP4-208ENST00000464168 C6orf132Q5T0Z8 1188 aa22.91■■□□□ 1.26
USP4-208ENST00000464168 GLMNQ92990 594 aa22.91■■□□□ 1.26
USP4-208ENST00000464168 GANQ9H2C0 597 aa22.91■■□□□ 1.26
USP4-208ENST00000464168 CLSTN2Q9H4D0 955 aa22.91■■□□□ 1.26
USP4-208ENST00000464168 CAPN8A6NHC0 703 aa22.9■■□□□ 1.26
USP4-208ENST00000464168 CDRT15L2A8MXV6 281 aa22.9■■□□□ 1.26
USP4-208ENST00000464168 BUB1O43683 1085 aa22.9■■□□□ 1.26
USP4-208ENST00000464168 TM7SF2O76062 418 aa22.9■■□□□ 1.26
USP4-208ENST00000464168 TMCC1O94876 653 aa22.9■■□□□ 1.26
USP4-208ENST00000464168 ANXA6P08133 673 aa22.9■■□□□ 1.26
USP4-208ENST00000464168 TIMP2P16035 220 aa22.9■■□□□ 1.26
USP4-208ENST00000464168 TSHRP16473 764 aa22.9■■□□□ 1.26
USP4-208ENST00000464168 EIF4A3P38919 411 aaKnown RBP22.9■■□□□ 1.26
USP4-208ENST00000464168 FAXCQ5TGI0 409 aa22.9■■□□□ 1.26
USP4-208ENST00000464168 MACC1Q6ZN28 852 aa22.9■■□□□ 1.26
USP4-208ENST00000464168 TP53I13Q8NBR0 393 aaPredicted RBP22.9■■□□□ 1.26
USP4-208ENST00000464168 NETO2Q8NC67 525 aa22.9■■□□□ 1.26
USP4-208ENST00000464168 NAT6Q93015 286 aa22.9■■□□□ 1.26
USP4-208ENST00000464168 GDAP1L1Q96MZ0 367 aa22.9■■□□□ 1.26
USP4-208ENST00000464168 C11orf70Q9BRQ4 267 aa22.9■■□□□ 1.26
USP4-208ENST00000464168 SLC13A1Q9BZW2 595 aa22.9■■□□□ 1.26
USP4-208ENST00000464168 TTYH3Q9C0H2 523 aa22.9■■□□□ 1.26
USP4-208ENST00000464168 KLC2Q9H0B6 622 aa22.9■■□□□ 1.26
USP4-208ENST00000464168 GTF3C3Q9Y5Q9 886 aa22.9■■□□□ 1.26
USP4-208ENST00000464168 ZSCAN5CA6NGD5 496 aaPredicted RBP22.89■■□□□ 1.25
USP4-208ENST00000464168 TOR1BO14657 336 aa22.89■■□□□ 1.25
USP4-208ENST00000464168 PDX1P52945 283 aa22.89■■□□□ 1.25
USP4-208ENST00000464168 PTP4A2Q12974 167 aa22.89■■□□□ 1.25
USP4-208ENST00000464168 KIF26BQ2KJY2 2108 aa22.89■■□□□ 1.25
USP4-208ENST00000464168 KLHL40Q2TBA0 621 aa22.89■■□□□ 1.25
USP4-208ENST00000464168 CXorf40AQ8TE69 158 aa22.89■■□□□ 1.25
USP4-208ENST00000464168 FAM172AQ8WUF8 416 aa22.89■■□□□ 1.25
USP4-208ENST00000464168 TTC9Q92623 222 aa22.89■■□□□ 1.25
USP4-208ENST00000464168 EPAS1Q99814 870 aa22.89■■□□□ 1.25
USP4-208ENST00000464168 CCDC3Q9BQI4 270 aa22.89■■□□□ 1.25
USP4-208ENST00000464168 C1QTNF7Q9BXJ2 289 aa22.89■■□□□ 1.25
USP4-208ENST00000464168 SEMA4CQ9C0C4 833 aa22.89■■□□□ 1.25
USP4-208ENST00000464168 DKK3Q9UBP4 350 aa22.89■■□□□ 1.25
USP4-208ENST00000464168 PADI4Q9UM07 663 aa22.89■■□□□ 1.25
USP4-208ENST00000464168 MFHAS1Q9Y4C4 1052 aa22.89■■□□□ 1.25
USP4-208ENST00000464168 CELA2BP08218 269 aaPredicted RBP22.88■■□□□ 1.25
USP4-208ENST00000464168 RFC1P35251 1148 aaPredicted RBP22.88■■□□□ 1.25
USP4-208ENST00000464168 KLK7P49862 253 aa22.88■■□□□ 1.25
USP4-208ENST00000464168 PPARDQ03181 441 aa22.88■■□□□ 1.25
USP4-208ENST00000464168 RAD51Q06609 339 aa22.88■■□□□ 1.25
USP4-208ENST00000464168 INO80DQ53TQ3 878 aaPredicted RBP22.88■■□□□ 1.25
USP4-208ENST00000464168 PYROXD2Q8N2H3 581 aa22.88■■□□□ 1.25
USP4-208ENST00000464168 WDR36Q8NI36 951 aaKnown RBP22.88■■□□□ 1.25
USP4-208ENST00000464168 WDR48Q8TAF3 677 aa22.88■■□□□ 1.25
USP4-208ENST00000464168 NTAN1Q96AB6 310 aa22.88■■□□□ 1.25
USP4-208ENST00000464168 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.88■■□□□ 1.25
USP4-208ENST00000464168 WRAP53Q9BUR4 548 aaKnown RBP22.88■■□□□ 1.25
USP4-208ENST00000464168 TAB2Q9NYJ8 693 aa22.88■■□□□ 1.25
USP4-208ENST00000464168 DACH1Q9UI36 760 aa22.88■■□□□ 1.25
USP4-208ENST00000464168 AHCTF1Q8WYP5 2266 aa22.87■■□□□ 1.25
USP4-208ENST00000464168 NTN3O00634 580 aaPredicted RBP22.87■■□□□ 1.25
USP4-208ENST00000464168 INSIG1O15503 277 aa22.87■■□□□ 1.25
USP4-208ENST00000464168 IGSF6O95976 241 aa22.87■■□□□ 1.25
USP4-208ENST00000464168 KRT3P12035 628 aa22.87■■□□□ 1.25
USP4-208ENST00000464168 EEF1GP26641 437 aaKnown RBP22.87■■□□□ 1.25
USP4-208ENST00000464168 JAM2P57087 298 aa22.87■■□□□ 1.25
USP4-208ENST00000464168 POLR2FP61218 127 aaKnown RBP22.87■■□□□ 1.25
USP4-208ENST00000464168 ESRP1Q6NXG1 681 aaKnown RBP22.87■■□□□ 1.25
USP4-208ENST00000464168 FOXR1Q6PIV2 292 aa22.87■■□□□ 1.25
USP4-208ENST00000464168 CLEC14AQ86T13 490 aa22.87■■□□□ 1.25
USP4-208ENST00000464168 ZNF354CQ86Y25 554 aa22.87■■□□□ 1.25
USP4-208ENST00000464168 ARL14Q8N4G2 192 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms