RNA–Protein interactions for RNA: ENST00000463419.1

NIN-208, Transcript of ninein, humanhuman

TSL 4

Gene NIN, Length 1,317 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-208ENST00000463419 TSC1Q92574 1164 aa13.14□□□□□ -0.31
NIN-208ENST00000463419 EXOC2Q96KP1 924 aa13.14□□□□□ -0.31
NIN-208ENST00000463419 KLF6Q99612 283 aaPredicted RBP13.14□□□□□ -0.31
NIN-208ENST00000463419 C1QTNF2Q9BXJ5 285 aa13.14□□□□□ -0.31
NIN-208ENST00000463419 SLC39A8Q9C0K1 460 aa13.14□□□□□ -0.31
NIN-208ENST00000463419 PDFQ9HBH1 243 aa13.14□□□□□ -0.31
NIN-208ENST00000463419 KLHL11Q9NVR0 708 aa13.14□□□□□ -0.31
NIN-208ENST00000463419 UCKL1Q9NWZ5 548 aa13.14□□□□□ -0.31
NIN-208ENST00000463419 LHX3Q9UBR4 397 aa13.14□□□□□ -0.31
NIN-208ENST00000463419 UBA2Q9UBT2 640 aaPredicted RBP13.14□□□□□ -0.31
NIN-208ENST00000463419 MFHAS1Q9Y4C4 1052 aa13.14□□□□□ -0.31
NIN-208ENST00000463419 HS3ST3A1Q9Y663 406 aa13.14□□□□□ -0.31
NIN-208ENST00000463419 SCINQ9Y6U3 715 aa13.14□□□□□ -0.31
NIN-208ENST00000463419 COL5A1P20908 1838 aaPredicted RBP13.14□□□□□ -0.31
NIN-208ENST00000463419 A0A1W2PQJ5 194 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 FAM149AA5PLN7 773 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 EIF3CLB5ME19 914 aaKnown RBP13.13□□□□□ -0.31
NIN-208ENST00000463419 TAF4O00268 1085 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 NEMP1O14524 444 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 AREL1O15033 823 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 INSIG1O15503 277 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 PRPSAP2O60256 369 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 LRCH4O75427 683 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 MYBL1P10243 752 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 ITIH2P19823 946 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 DGKAP23743 735 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 ACADVLP49748 655 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 PAPOLAP51003 745 aaKnown RBP13.13□□□□□ -0.31
NIN-208ENST00000463419 UBASH3AP57075 661 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 RAD51Q06609 339 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 SGCGQ13326 291 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 TDRD12Q587J7 1177 aaKnown RBP13.13□□□□□ -0.31
NIN-208ENST00000463419 KYAT3Q6YP21 454 aaKnown RBP13.13□□□□□ -0.31
NIN-208ENST00000463419 RFX8Q6ZV50 586 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 PTAR1Q7Z6K3 402 aaPredicted RBP13.13□□□□□ -0.31
NIN-208ENST00000463419 TTC7BQ86TV6 843 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 FAM174AQ8TBP5 190 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 TRIM11Q96F44 468 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 LENG8Q96PV6 779 aaPredicted RBP13.13□□□□□ -0.31
NIN-208ENST00000463419 EIF3CQ99613 913 aaKnown RBP13.13□□□□□ -0.31
NIN-208ENST00000463419 MRPL47Q9HD33 250 aaKnown RBP13.13□□□□□ -0.31
NIN-208ENST00000463419 GPR27Q9NS67 375 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 DONSONQ9NYP3 566 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 PCDHGA1Q9Y5H4 931 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 TP53BP1Q12888 1972 aaPredicted RBP13.13□□□□□ -0.31
NIN-208ENST00000463419 TPRP12270 2363 aaKnown RBP13.13□□□□□ -0.31
NIN-208ENST00000463419 FREM2Q5SZK8 3169 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 TRIM38O00635 465 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 FPGTO14772 594 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 DAPK3O43293 454 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 PRAMEF11O60813 436 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 RFPL3O75679 317 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 ERCC2P18074 760 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 CLDN6P56747 220 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 ZNF542PQ5EBM4 170 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 PPP6R3Q5H9R7 873 aaPredicted RBP13.13□□□□□ -0.31
NIN-208ENST00000463419 AFMIDQ63HM1 303 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 KDM7AQ6ZMT4 941 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 ZSCAN30Q86W11 494 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 PROSER1Q86XN7 944 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 DCP2Q8IU60 420 aaKnown RBP13.13□□□□□ -0.31
NIN-208ENST00000463419 PSTKQ8IV42 348 aaKnown RBP13.13□□□□□ -0.31
NIN-208ENST00000463419 ARHGAP12Q8IWW6 846 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 CPLX3Q8WVH0 158 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 ASB12Q8WXK4 309 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 SYN2Q92777 582 aaPredicted RBP13.13□□□□□ -0.31
NIN-208ENST00000463419 ARHGEF26Q96DR7 871 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.13□□□□□ -0.31
NIN-208ENST00000463419 CPEB1Q9BZB8 566 aaKnown RBP13.13□□□□□ -0.31
NIN-208ENST00000463419 CAPN11Q9UMQ6 739 aa13.13□□□□□ -0.31
NIN-208ENST00000463419 BZW2Q9Y6E2 419 aaKnown RBP13.13□□□□□ -0.31
NIN-208ENST00000463419 CHD5Q8TDI0 1954 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 ARHGAP42A6NI28 874 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 GOLGA6L19H0YKK7 550 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 SIGLEC6O43699 453 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 MMP20O60882 483 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 PIAS2O75928 621 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 PIGNO95427 931 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 C1SP09871 688 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 GIMD1P0DJR0 217 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 TCF4P15884 667 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 TIMP2P16035 220 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 CKMT2P17540 419 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 IL1R2P27930 398 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 PCK1P35558 622 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 RABIFP47224 123 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 HCAR3P49019 387 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 ZBED6P86452 979 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 FZD2Q14332 565 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 ZSCAN23Q3MJ62 389 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 TPRG1LQ5T0D9 272 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 ARHGAP36Q6ZRI8 547 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 NPWQ8N729 165 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 MDM1Q8TC05 714 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 IFT43Q96FT9 208 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 NCAPGQ9BPX3 1015 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 THAP2Q9H0W7 228 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 CCDC86Q9H6F5 360 aaKnown RBP13.12□□□□□ -0.31
NIN-208ENST00000463419 DNAJC28Q9NX36 388 aa13.12□□□□□ -0.31
NIN-208ENST00000463419 CWC15Q9P013 229 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms