RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 PCDHGA12O60330 932 aa18.19■□□□□ 0.5
LINC00960-201ENST00000463183 MMP20O60882 483 aa18.19■□□□□ 0.5
LINC00960-201ENST00000463183 PRKCGP05129 697 aa18.19■□□□□ 0.5
LINC00960-201ENST00000463183 CD48P09326 243 aa18.19■□□□□ 0.5
LINC00960-201ENST00000463183 ATXN1LP0C7T5 689 aaKnown RBP18.19■□□□□ 0.5
LINC00960-201ENST00000463183 EPHA8P29322 1005 aaPredicted RBP18.19■□□□□ 0.5
LINC00960-201ENST00000463183 AFMIDQ63HM1 303 aa18.19■□□□□ 0.5
LINC00960-201ENST00000463183 GCNT7Q6ZNI0 430 aa18.19■□□□□ 0.5
LINC00960-201ENST00000463183 IQCHQ86VS3 1027 aa18.19■□□□□ 0.5
LINC00960-201ENST00000463183 CAMK1DQ8IU85 385 aa18.19■□□□□ 0.5
LINC00960-201ENST00000463183 EID2Q8N6I1 236 aa18.19■□□□□ 0.5
LINC00960-201ENST00000463183 CXorf40AQ8TE69 158 aa18.19■□□□□ 0.5
LINC00960-201ENST00000463183 TEKT4Q8WW24 435 aa18.19■□□□□ 0.5
LINC00960-201ENST00000463183 VOPP1Q96AW1 172 aa18.19■□□□□ 0.5
LINC00960-201ENST00000463183 CDC6Q99741 560 aa18.19■□□□□ 0.5
LINC00960-201ENST00000463183 CAAP1Q9H8G2 361 aa18.19■□□□□ 0.5
LINC00960-201ENST00000463183 UVRAGQ9P2Y5 699 aa18.19■□□□□ 0.5
LINC00960-201ENST00000463183 FTSJ1Q9UET6 329 aa18.19■□□□□ 0.5
LINC00960-201ENST00000463183 KLK13Q9UKR3 277 aa18.19■□□□□ 0.5
LINC00960-201ENST00000463183 APOBEC2Q9Y235 224 aaKnown RBP18.19■□□□□ 0.5
LINC00960-201ENST00000463183 MAP1BP46821 2468 aaKnown RBP18.18■□□□□ 0.5
LINC00960-201ENST00000463183 EPG5Q9HCE0 2579 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 SSU72P8A0A1W2PR75 194 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 TTC24A2A3L6 582 aaPredicted RBP18.18■□□□□ 0.5
LINC00960-201ENST00000463183 AKR1B15C9JRZ8 316 aaPredicted RBP18.18■□□□□ 0.5
LINC00960-201ENST00000463183 SPINT1O43278 529 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 PROSCO94903 275 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 TIMP2P16035 220 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 SCNN1BP51168 640 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 SHC2P98077 582 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 IL10RBQ08334 325 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 OVGP1Q12889 678 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 ZNF235Q14590 738 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 MESDQ14696 234 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 ASTE1Q2TB18 679 aaPredicted RBP18.18■□□□□ 0.5
LINC00960-201ENST00000463183 ZNF542PQ5EBM4 170 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 DBX2Q6ZNG2 339 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 Q6ZSR6 202 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 SRLQ86TD4 932 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 SLCO6A1Q86UG4 719 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 CNGA4Q8IV77 575 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 OXR1Q8N573 874 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 ATPAF2Q8N5M1 289 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 LZTR1Q8N653 840 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 KCTD6Q8NC69 237 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 SAP25Q8TEE9 199 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 SUV39H2Q9H5I1 410 aa18.18■□□□□ 0.5
LINC00960-201ENST00000463183 POM121BA6NF01 834 aa18.17■□□□□ 0.5
LINC00960-201ENST00000463183 A6NNZ2 444 aa18.17■□□□□ 0.5
LINC00960-201ENST00000463183 FPGTO14772 594 aa18.17■□□□□ 0.5
LINC00960-201ENST00000463183 BUB1BO60566 1050 aaPredicted RBP18.17■□□□□ 0.5
LINC00960-201ENST00000463183 TRIM16O95361 564 aa18.17■□□□□ 0.5
LINC00960-201ENST00000463183 MAP3K6O95382 1288 aa18.17■□□□□ 0.5
LINC00960-201ENST00000463183 TMEM253P0C7T8 217 aa18.17■□□□□ 0.5
LINC00960-201ENST00000463183 TAS2R40P59535 323 aa18.17■□□□□ 0.5
LINC00960-201ENST00000463183 SLC10A7Q0GE19 358 aa18.17■□□□□ 0.5
LINC00960-201ENST00000463183 LBRQ14739 615 aaKnown RBP18.17■□□□□ 0.5
LINC00960-201ENST00000463183 TMCO4Q5TGY1 634 aa18.17■□□□□ 0.5
LINC00960-201ENST00000463183 BAHD1Q8TBE0 780 aaPredicted RBP18.17■□□□□ 0.5
LINC00960-201ENST00000463183 CPEB1Q9BZB8 566 aaKnown RBP18.17■□□□□ 0.5
LINC00960-201ENST00000463183 SEPT3Q9UH03 358 aa18.17■□□□□ 0.5
LINC00960-201ENST00000463183 COQ6Q9Y2Z9 468 aa18.17■□□□□ 0.5
LINC00960-201ENST00000463183 AREL1O15033 823 aa18.16■□□□□ 0.5
LINC00960-201ENST00000463183 MUSKO15146 869 aa18.16■□□□□ 0.5
LINC00960-201ENST00000463183 YKT6O15498 198 aa18.16■□□□□ 0.5
LINC00960-201ENST00000463183 TNNT1P13805 278 aa18.16■□□□□ 0.5
LINC00960-201ENST00000463183 SERPINA4P29622 427 aa18.16■□□□□ 0.5
LINC00960-201ENST00000463183 SERPINB6P35237 376 aa18.16■□□□□ 0.5
LINC00960-201ENST00000463183 FRYQ5TBA9 3013 aa18.16■□□□□ 0.5
LINC00960-201ENST00000463183 SLC22A18ASQ8N1D0 253 aa18.16■□□□□ 0.5
LINC00960-201ENST00000463183 SLC35G2Q8TBE7 412 aa18.16■□□□□ 0.5
LINC00960-201ENST00000463183 NSMCE1Q8WV22 266 aa18.16■□□□□ 0.5
LINC00960-201ENST00000463183 CNDP2Q96KP4 475 aaKnown RBP18.16■□□□□ 0.5
LINC00960-201ENST00000463183 BMFQ96LC9 184 aa18.16■□□□□ 0.5
LINC00960-201ENST00000463183 ATP13A3Q9H7F0 1226 aa18.16■□□□□ 0.5
LINC00960-201ENST00000463183 ERVMER34-1Q9H9K5 563 aa18.16■□□□□ 0.5
LINC00960-201ENST00000463183 PCDH12Q9NPG4 1184 aa18.16■□□□□ 0.5
LINC00960-201ENST00000463183 DNAJC28Q9NX36 388 aa18.16■□□□□ 0.5
LINC00960-201ENST00000463183 C1QTNF9BB2RNN3 333 aa18.15■□□□□ 0.5
LINC00960-201ENST00000463183 FFAR2O15552 330 aa18.15■□□□□ 0.5
LINC00960-201ENST00000463183 TNFSF14O43557 240 aa18.15■□□□□ 0.5
LINC00960-201ENST00000463183 TM7SF2O76062 418 aa18.15■□□□□ 0.5
LINC00960-201ENST00000463183 LDOC1O95751 146 aaPredicted RBP18.15■□□□□ 0.5
LINC00960-201ENST00000463183 C1QTNF9P0C862 333 aa18.15■□□□□ 0.5
LINC00960-201ENST00000463183 MAXP61244 160 aa18.15■□□□□ 0.5
LINC00960-201ENST00000463183 BCL2L1Q07817 233 aa18.15■□□□□ 0.5
LINC00960-201ENST00000463183 DNAJC3Q13217 504 aa18.15■□□□□ 0.5
LINC00960-201ENST00000463183 PDE1CQ14123 709 aaPredicted RBP18.15■□□□□ 0.5
LINC00960-201ENST00000463183 DPYSL3Q14195 570 aa18.15■□□□□ 0.5
LINC00960-201ENST00000463183 RFTN1Q14699 578 aaPredicted RBP18.15■□□□□ 0.5
LINC00960-201ENST00000463183 ERAP2Q6P179 960 aa18.15■□□□□ 0.5
LINC00960-201ENST00000463183 ABI3BPQ7Z7G0 1075 aa18.15■□□□□ 0.5
LINC00960-201ENST00000463183 ZSWIM9Q86XI8 627 aa18.15■□□□□ 0.5
LINC00960-201ENST00000463183 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.15■□□□□ 0.5
LINC00960-201ENST00000463183 PDCD6IPQ8WUM4 868 aaKnown RBP18.15■□□□□ 0.5
LINC00960-201ENST00000463183 TSC1Q92574 1164 aa18.15■□□□□ 0.5
LINC00960-201ENST00000463183 C1QTNF2Q9BXJ5 285 aa18.15■□□□□ 0.5
LINC00960-201ENST00000463183 DKK3Q9UBP4 350 aa18.15■□□□□ 0.5
LINC00960-201ENST00000463183 WASF3Q9UPY6 502 aa18.15■□□□□ 0.5
LINC00960-201ENST00000463183 A8MX80 341 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms