RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 TRAFD1O14545 582 aaPredicted RBP12.22□□□□□ -0.45
HPS1-206ENST00000462743 APOL1O14791 398 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 VILLO15195 856 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 KRT1P04264 644 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 UGT2B4P06133 528 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 CTNNA1P35221 906 aaKnown RBP12.22□□□□□ -0.45
HPS1-206ENST00000462743 ABL2P42684 1182 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 AFF3P51826 1226 aaKnown RBP12.22□□□□□ -0.45
HPS1-206ENST00000462743 COPS2P61201 443 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 GBE1Q04446 702 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 OVGP1Q12889 678 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 TFDP2Q14188 446 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 PUM1Q14671 1186 aaKnown RBP eCLIP12.22□□□□□ -0.45
HPS1-206ENST00000462743 PPP2R5EQ16537 467 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 POM121L1PQ3SYA9 428 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 AASDHQ4L235 1098 aaPredicted RBP12.22□□□□□ -0.45
HPS1-206ENST00000462743 TMEM259Q4ZIN3 620 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 STPG1Q5TH74 334 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 KIAA1161Q6NSJ0 714 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 BRAT1Q6PJG6 821 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 SPOCD1Q6ZMY3 1216 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 BZW1Q7L1Q6 419 aaKnown RBP12.22□□□□□ -0.45
HPS1-206ENST00000462743 IQCHQ86VS3 1027 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 HORMAD1Q86X24 394 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 ZCCHC9Q8N567 271 aaKnown RBP12.22□□□□□ -0.45
HPS1-206ENST00000462743 OR6K2Q8NGY2 324 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 RBM41Q96IZ5 413 aaKnown RBP12.22□□□□□ -0.45
HPS1-206ENST00000462743 NSMCE3Q96MG7 304 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 NUDCD1Q96RS6 583 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 MGME1Q9BQP7 344 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 RTKNQ9BST9 563 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 MIR1-1HGQ9H1L0 117 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 KLHL11Q9NVR0 708 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 HS3ST3A1Q9Y663 406 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 SLCO1B1Q9Y6L6 691 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 PLXNA2O75051 1894 aa12.22□□□□□ -0.45
HPS1-206ENST00000462743 ATXN2Q99700 1313 aaKnown RBP12.21□□□□□ -0.45
HPS1-206ENST00000462743 A0A1W2PQU0 124 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 CCDC66A2RUB6 948 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 GRID2IPA4D2P6 1211 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 CFAP69A5D8W1 941 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 UPK3BL1B0FP48 263 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 UPK3BL2E5RIL1 263 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 PRAMEF26H0Y7S4 382 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 HTRA2O43464 458 aaPredicted RBP12.21□□□□□ -0.45
HPS1-206ENST00000462743 GJB3O75712 270 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 CFIP05156 583 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 ENGP17813 658 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 PTPN7P35236 360 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 MMP13P45452 471 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 SCNN1BP51168 640 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 PPP2CBP62714 309 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 POLR2LP62875 67 aaKnown RBP12.21□□□□□ -0.45
HPS1-206ENST00000462743 RPS21P63220 83 aaKnown RBP12.21□□□□□ -0.45
HPS1-206ENST00000462743 PPP2CAP67775 309 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 BNC1Q01954 994 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 PPIDQ08752 370 aaKnown RBP12.21□□□□□ -0.45
HPS1-206ENST00000462743 ZNF235Q14590 738 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 PDK1Q15118 436 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 TEAD4Q15561 434 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 UGP2Q16851 508 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 RSPO4Q2I0M5 234 aaPredicted RBP12.21□□□□□ -0.45
HPS1-206ENST00000462743 ZNF284Q2VY69 593 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 TMEM52BQ4KMG9 183 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 SETMARQ53H47 684 aaPredicted RBP12.21□□□□□ -0.45
HPS1-206ENST00000462743 ODF2Q5BJF6 829 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 TFDP3Q5H9I0 405 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 NAPEPLDQ6IQ20 393 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 IL27RAQ6UWB1 636 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 TTC7BQ86TV6 843 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 NT5DC3Q86UY8 548 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 CAMK1DQ8IU85 385 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 SYCE1Q8N0S2 351 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 PGBD5Q8N414 524 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 MFSD2AQ8NA29 543 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 FAM174AQ8TBP5 190 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.21□□□□□ -0.45
HPS1-206ENST00000462743 KRT35Q92764 455 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 RMDN1Q96DB5 314 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 EXOC2Q96KP1 924 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 OLFM3Q96PB7 478 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 LENG8Q96PV6 779 aaPredicted RBP12.21□□□□□ -0.45
HPS1-206ENST00000462743 IL12RB2Q99665 862 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 DESI2Q9BSY9 194 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 EDEM2Q9BV94 578 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 C1QTNF2Q9BXJ5 285 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 SLC17A9Q9BYT1 436 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 ATP13A3Q9H7F0 1226 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 TMEM9BQ9NQ34 198 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 DNAAF2Q9NVR5 837 aaKnown RBP12.21□□□□□ -0.45
HPS1-206ENST00000462743 ZFR2Q9UPR6 939 aaKnown RBP12.21□□□□□ -0.45
HPS1-206ENST00000462743 ATP8A1Q9Y2Q0 1164 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 PPIL1Q9Y3C6 166 aa12.21□□□□□ -0.45
HPS1-206ENST00000462743 KNTC1P50748 2209 aa12.21□□□□□ -0.46
HPS1-206ENST00000462743 LRRK1Q38SD2 2015 aa12.2□□□□□ -0.46
HPS1-206ENST00000462743 hCG_1818297A0A087WSY0 165 aa12.2□□□□□ -0.46
HPS1-206ENST00000462743 MIF4GDA9UHW6 222 aaKnown RBP12.2□□□□□ -0.46
HPS1-206ENST00000462743 SPINT1O43278 529 aa12.2□□□□□ -0.46
HPS1-206ENST00000462743 SOCS5O75159 536 aa12.2□□□□□ -0.46
HPS1-206ENST00000462743 PCDH8O95206 1070 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms