RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 KRIT1O00522 736 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 MUSKO15146 869 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 MID1O15344 667 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 BNIP3LO60238 219 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 LEFTY1O75610 366 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 NEBLO76041 1014 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 JCHAINP01591 159 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 TUBB4AP04350 444 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 ATP1A1P05023 1023 aaKnown RBP10.05□□□□□ -0.8
VPS45-204ENST00000460366 CTSLP07711 333 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 RBP3P10745 1247 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 ATP5OP48047 213 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 PXNP49023 591 aaPredicted RBP10.05□□□□□ -0.8
VPS45-204ENST00000460366 TPMTP51580 245 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 SUOXP51687 545 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 ETF1P62495 437 aaKnown RBP10.05□□□□□ -0.8
VPS45-204ENST00000460366 SLC14A2Q15849 920 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 CCNG2Q16589 344 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 ZNF805Q5CZA5 627 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 SPDYCQ5MJ68 293 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 ATXN7L2Q5T6C5 722 aaPredicted RBP10.05□□□□□ -0.8
VPS45-204ENST00000460366 PAPD7Q5XG87 772 aaKnown RBP10.05□□□□□ -0.8
VPS45-204ENST00000460366 DRICH1Q6PGQ1 229 aaPredicted RBP10.05□□□□□ -0.8
VPS45-204ENST00000460366 DARS2Q6PI48 645 aaKnown RBP10.05□□□□□ -0.8
VPS45-204ENST00000460366 NCEH1Q6PIU2 408 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 ZC3H18Q86VM9 953 aaKnown RBP10.05□□□□□ -0.8
VPS45-204ENST00000460366 CDKL3Q8IVW4 592 aaPredicted RBP10.05□□□□□ -0.8
VPS45-204ENST00000460366 PGBD5Q8N414 524 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 RYBPQ8N488 228 aaPredicted RBP10.05□□□□□ -0.8
VPS45-204ENST00000460366 NKD2Q969F2 451 aaPredicted RBP10.05□□□□□ -0.8
VPS45-204ENST00000460366 VOPP1Q96AW1 172 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 WDR24Q96S15 920 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 OSBPL9Q96SU4 736 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 NAPGQ99747 312 aaPredicted RBP10.05□□□□□ -0.8
VPS45-204ENST00000460366 HDAC8Q9BY41 377 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 POLR1EQ9GZS1 481 aaKnown RBP10.05□□□□□ -0.8
VPS45-204ENST00000460366 SLC6A17Q9H1V8 727 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 ATP13A3Q9H7F0 1226 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 SGK2Q9HBY8 427 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 NT5MQ9NPB1 228 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 FBXL12Q9NXK8 326 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 EVLQ9UI08 416 aaPredicted RBP10.05□□□□□ -0.8
VPS45-204ENST00000460366 TRHDEQ9UKU6 1024 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 SARDHQ9UL12 918 aa10.05□□□□□ -0.8
VPS45-204ENST00000460366 TPX2Q9ULW0 747 aaKnown RBP10.05□□□□□ -0.8
VPS45-204ENST00000460366 NYNRINQ9P2P1 1898 aaKnown RBP10.04□□□□□ -0.8
VPS45-204ENST00000460366 IGHV1OR15-9A0A0B4J2B8 117 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 TCRBV7S2A1N4TA0A589 114 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 TSPAN11A1L157 253 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 CFAP69A5D8W1 941 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 H0Y858 1186 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 INSIG1O15503 277 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 HTRA2O43464 458 aaPredicted RBP10.04□□□□□ -0.8
VPS45-204ENST00000460366 SOCS5O75159 536 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 RPP40O75818 363 aaKnown RBP10.04□□□□□ -0.8
VPS45-204ENST00000460366 FGGP02679 453 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 ITGB7P26010 798 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 PTPN3P26045 913 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 CD6P30203 668 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 STIP1P31948 543 aaKnown RBP10.04□□□□□ -0.8
VPS45-204ENST00000460366 CXCR5P32302 372 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 DRD3P35462 400 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 RGRP47804 291 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 PSMD8P48556 350 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 SCNN1BP51168 640 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 WASHC5Q12768 1159 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 ZBTB17Q13105 803 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 SIX1Q15475 284 aaPredicted RBP10.04□□□□□ -0.8
VPS45-204ENST00000460366 LONRF2Q1L5Z9 754 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 BRAT1Q6PJG6 821 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 GDPD4Q6W3E5 623 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 ERN2Q76MJ5 926 aaKnown RBP10.04□□□□□ -0.8
VPS45-204ENST00000460366 HDDC3Q8N4P3 179 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 AADATQ8N5Z0 425 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 CNTD1Q8N815 330 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 ACTRT1Q8TDG2 376 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 HTR3CQ8WXA8 447 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 RAB7BQ96AH8 199 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 ERLEC1Q96DZ1 483 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 FAM122AQ96E09 287 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 ZNF419Q96HQ0 510 aaPredicted RBP10.04□□□□□ -0.8
VPS45-204ENST00000460366 ZC3H10Q96K80 434 aaKnown RBP10.04□□□□□ -0.8
VPS45-204ENST00000460366 TEKT5Q96M29 485 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 OMDQ99983 421 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 TPSD1Q9BZJ3 242 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 NEUROG2Q9H2A3 272 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 SUV39H2Q9H5I1 410 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 ZDHHC6Q9H6R6 413 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 USP29Q9HBJ7 922 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 NOD2Q9HC29 1040 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 DYRK4Q9NR20 520 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 WSB2Q9NYS7 404 aaPredicted RBP10.04□□□□□ -0.8
VPS45-204ENST00000460366 RNF14Q9UBS8 474 aa10.04□□□□□ -0.8
VPS45-204ENST00000460366 DRG1Q9Y295 367 aaKnown RBP10.04□□□□□ -0.8
VPS45-204ENST00000460366 R3HDM2Q9Y2K5 976 aaKnown RBP10.04□□□□□ -0.8
VPS45-204ENST00000460366 A0A1W2PP55 124 aa10.03□□□□□ -0.8
VPS45-204ENST00000460366 C5orf60A6NFR6 353 aa10.03□□□□□ -0.8
VPS45-204ENST00000460366 C10orf142B7Z368 130 aa10.03□□□□□ -0.8
VPS45-204ENST00000460366 KPNA3O00505 521 aaPredicted RBP10.03□□□□□ -0.8
VPS45-204ENST00000460366 TRAFD1O14545 582 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms