RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 SLC39A4Q6P5W5 647 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 SPPL2AQ8TCT8 520 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 MAML3Q96JK9 1138 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 INVSQ9Y283 1065 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 ADCY6O43306 1168 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 HS6ST1O60243 411 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 TLR5O60602 858 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 EPB42P16452 691 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 FOXN2P32314 431 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 POLR2LP62875 67 aaKnown RBP14.87□□□□□ -0.03
PTPRU-205ENST00000460170 NEDD8Q15843 81 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 ACBD5Q5T8D3 534 aaPredicted RBP14.87□□□□□ -0.03
PTPRU-205ENST00000460170 MAGED4Q96JG8 741 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 SERAC1Q96JX3 654 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 TBCDQ9BTW9 1192 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 GBA3Q9H227 469 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 BTBD19C9JJ37 291 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 CD3EAPO15446 510 aaKnown RBP14.87□□□□□ -0.03
PTPRU-205ENST00000460170 MSI1O43347 362 aaKnown RBP14.87□□□□□ -0.03
PTPRU-205ENST00000460170 PLIN3O60664 434 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 LPOP22079 712 aaPredicted RBP14.87□□□□□ -0.03
PTPRU-205ENST00000460170 LIMK2P53671 638 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 EML3Q32P44 896 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 NECAB2Q7Z6G3 386 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 DENND1CQ8IV53 801 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 OR4L1Q8NH43 312 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 DNAJB14Q8TBM8 379 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 PRR23AA6NEV1 266 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 STK25O00506 426 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 CFHP08603 1231 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 ANXA5P08758 320 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 CDH13P55290 713 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 WDR4P57081 412 aaKnown RBP14.87□□□□□ -0.03
PTPRU-205ENST00000460170 POU5F1Q01860 360 aaKnown RBP14.87□□□□□ -0.03
PTPRU-205ENST00000460170 METTL21CQ5VZV1 264 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 ARHGAP17Q68EM7 881 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 ERAP2Q6P179 960 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 PGBD3Q8N328 593 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 CMASQ8NFW8 434 aaPredicted RBP14.87□□□□□ -0.03
PTPRU-205ENST00000460170 MFSD3Q96ES6 412 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 FTHL17Q9BXU8 183 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 HPS4Q9NQG7 708 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 CHKBQ9Y259 395 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 BTRCQ9Y297 605 aa14.87□□□□□ -0.03
PTPRU-205ENST00000460170 PEX1O43933 1283 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 TYMPP19971 482 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 DQX1Q8TE96 717 aaKnown RBP14.86□□□□□ -0.03
PTPRU-205ENST00000460170 PIK3R5Q8WYR1 880 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 EXOC2Q96KP1 924 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 DCUN1D5Q9BTE7 237 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 TRAF6Q9Y4K3 522 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 MGRN1O60291 552 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 BCL10O95999 233 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 PPP1R15BQ5SWA1 713 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 SH3PXD2AQ5TCZ1 1133 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 DENND2DQ9H6A0 471 aaPredicted RBP14.86□□□□□ -0.03
PTPRU-205ENST00000460170 CNOT3O75175 753 aaKnown RBP14.86□□□□□ -0.03
PTPRU-205ENST00000460170 CSH1P0DML2 217 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 CSH2P0DML3 217 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 ACSM2AQ08AH3 577 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 ACSM2BQ68CK6 577 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 USP45Q70EL2 814 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 TRMT11Q7Z4G4 463 aaKnown RBP14.86□□□□□ -0.03
PTPRU-205ENST00000460170 ZNF276Q8N554 614 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 CDYL2Q8N8U2 506 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 SETD9Q8NE22 299 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 SELENOMQ8WWX9 145 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 CAMKK2Q96RR4 588 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 BBS2Q9BXC9 721 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 ZCCHC2Q9C0B9 1178 aaKnown RBP14.86□□□□□ -0.03
PTPRU-205ENST00000460170 PADI4Q9UM07 663 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 MAGEC1O60732 1142 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 SIN3BO75182 1162 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 LRIG2O94898 1065 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 KCNH1O95259 989 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 PARNO95453 639 aaKnown RBP14.86□□□□□ -0.03
PTPRU-205ENST00000460170 L1CAMP32004 1257 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 MAPK8P45983 427 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 TMED10P49755 219 aaKnown RBP14.86□□□□□ -0.03
PTPRU-205ENST00000460170 GALNT3Q14435 633 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 MARK2Q7KZI7 788 aaKnown RBP14.86□□□□□ -0.03
PTPRU-205ENST00000460170 CUZD1Q86UP6 607 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 CYP4Z1Q86W10 505 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 IRGQQ8WZA9 623 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 TM6SF2Q9BZW4 377 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 BPIFA1Q9NP55 256 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 AHSPQ9NZD4 102 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 DTLQ9NZJ0 730 aa14.86□□□□□ -0.03
PTPRU-205ENST00000460170 CORO1CQ9ULV4 474 aaPredicted RBP14.86□□□□□ -0.03
PTPRU-205ENST00000460170 IL1R2P27930 398 aa14.85□□□□□ -0.03
PTPRU-205ENST00000460170 PSMB9P28065 219 aa14.85□□□□□ -0.03
PTPRU-205ENST00000460170 PRKG2Q13237 762 aa14.85□□□□□ -0.03
PTPRU-205ENST00000460170 SLC44A4Q53GD3 710 aa14.85□□□□□ -0.03
PTPRU-205ENST00000460170 NOL9Q5SY16 702 aaKnown RBP14.85□□□□□ -0.03
PTPRU-205ENST00000460170 GPRIN3Q6ZVF9 776 aa14.85□□□□□ -0.03
PTPRU-205ENST00000460170 FAM228AQ86W67 206 aa14.85□□□□□ -0.03
PTPRU-205ENST00000460170 NAT8LQ8N9F0 302 aa14.85□□□□□ -0.03
PTPRU-205ENST00000460170 PTCD2Q8WV60 388 aaKnown RBP14.85□□□□□ -0.03
PTPRU-205ENST00000460170 GNPTGQ9UJJ9 305 aa14.85□□□□□ -0.03
PTPRU-205ENST00000460170 ATG7O95352 703 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms