RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 C4orf22Q6V702 233 aa10.82□□□□□ -0.68
UBR4-208ENST00000459947 CPNE8Q86YQ8 564 aa10.82□□□□□ -0.68
UBR4-208ENST00000459947 PIGKQ92643 395 aa10.82□□□□□ -0.68
UBR4-208ENST00000459947 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.82□□□□□ -0.68
UBR4-208ENST00000459947 JRKLQ9Y4A0 524 aa10.82□□□□□ -0.68
UBR4-208ENST00000459947 HYOU1Q9Y4L1 999 aa10.82□□□□□ -0.68
UBR4-208ENST00000459947 TBC1D3DA0A087WVF3 549 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 TBC1D3IA0A087WXS9 549 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 TBC1D3EA0A087X179 549 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 TBC1D3KA0A087X1G2 549 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 TBC1D3FA6NER0 549 aaPredicted RBP10.81□□□□□ -0.68
UBR4-208ENST00000459947 TBC1D3LB9A6J9 549 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 NEMP1O14524 444 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 PYGLP06737 847 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 TBC1D3HP0C7X1 549 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 VAV1P15498 845 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 RACK1P63244 317 aaKnown RBP10.81□□□□□ -0.68
UBR4-208ENST00000459947 PRPSAP1Q14558 356 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 TBC1D3GQ6DHY5 549 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 TBC1D3CQ6IPX1 549 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 TBC1D3Q8IZP1 549 aaPredicted RBP10.81□□□□□ -0.68
UBR4-208ENST00000459947 KRT35Q92764 455 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 NT5MQ9NPB1 228 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 DUSP10Q9Y6W6 482 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 CDH23Q9H251 3354 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 ANTXRLA6NF34 631 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 PRAMEF26H0Y7S4 382 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 H7C0C1 242 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 PSMD11O00231 422 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 DDX3YO15523 660 aaKnown RBP10.81□□□□□ -0.68
UBR4-208ENST00000459947 LATO43561 262 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 ATP5OP48047 213 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 SLC10A7Q0GE19 358 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 AP1B1Q10567 949 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 ATXN7L2Q5T6C5 722 aaPredicted RBP10.81□□□□□ -0.68
UBR4-208ENST00000459947 KAZNQ674X7 775 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 PARS2Q7L3T8 475 aaKnown RBP10.81□□□□□ -0.68
UBR4-208ENST00000459947 FAM124AQ86V42 546 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 ECHDC3Q96DC8 303 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 SLC25A51Q9H1U9 297 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 SLC6A17Q9H1V8 727 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 LZTFL1Q9NQ48 299 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 FEZ2Q9UHY8 353 aaPredicted RBP10.81□□□□□ -0.68
UBR4-208ENST00000459947 FADS3Q9Y5Q0 445 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 HS3ST3A1Q9Y663 406 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 A0A1W2PPC4 97 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 C10orf142B7Z368 130 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 HTRA2O43464 458 aaPredicted RBP10.81□□□□□ -0.68
UBR4-208ENST00000459947 FSBPO95073 299 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 FTCDO95954 541 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 PEX11BO96011 259 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 CTSLP07711 333 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 SCNN1BP51168 640 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 ITKQ08881 620 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 SRSF5Q13243 272 aaKnown RBP10.81□□□□□ -0.68
UBR4-208ENST00000459947 SGCGQ13326 291 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 INAVAQ3KP66 663 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 USP45Q70EL2 814 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 TMEFF1Q8IYR6 380 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 NETO1Q8TDF5 533 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 ADGRE3Q9BY15 652 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 CAPN6Q9Y6Q1 641 aa10.81□□□□□ -0.68
UBR4-208ENST00000459947 THADAQ6YHU6 1953 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 CES2O00748 559 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 RIOK3O14730 519 aaKnown RBP10.8□□□□□ -0.68
UBR4-208ENST00000459947 BCAT2O15382 392 aaPredicted RBP10.8□□□□□ -0.68
UBR4-208ENST00000459947 CER1O95813 267 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 DYNLT1P63172 113 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 LENG8Q96PV6 779 aaPredicted RBP10.8□□□□□ -0.68
UBR4-208ENST00000459947 ARRDC1-AS1Q9H2J1 176 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 SEMA4GQ9NTN9 838 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 INVSQ9Y283 1065 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 TNRC6BQ9UPQ9 1833 aaKnown RBP10.8□□□□□ -0.68
UBR4-208ENST00000459947 PCDH8O95206 1070 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 ZNF30P17039 623 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 ACSL1P33121 698 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 TEX44Q53QW1 395 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 DPPA4Q7L190 304 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 SNX19Q92543 992 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 TFR2Q9UP52 801 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 SPAG17Q6Q759 2223 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 AREL1O15033 823 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 ANXA9O76027 345 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 ZNF883P0CG24 379 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 AFF3P51826 1226 aaKnown RBP10.8□□□□□ -0.68
UBR4-208ENST00000459947 GEMP55040 296 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 C21orf59P57076 290 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 EIF3EP60228 445 aaKnown RBP10.8□□□□□ -0.68
UBR4-208ENST00000459947 AGERQ15109 404 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 ARHGAP36Q6ZRI8 547 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 ASCL5Q7RTU5 278 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 TSEN2Q8NCE0 465 aaKnown RBP10.8□□□□□ -0.68
UBR4-208ENST00000459947 HTR3CQ8WXA8 447 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 SEMA3CQ99985 751 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 KCND1Q9NSA2 647 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 SARDHQ9UL12 918 aa10.8□□□□□ -0.68
UBR4-208ENST00000459947 OPHN1O60890 802 aa10.79□□□□□ -0.68
UBR4-208ENST00000459947 JCHAINP01591 159 aa10.79□□□□□ -0.68
UBR4-208ENST00000459947 HNRNPA2B1P22626 353 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms