RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 NLGN3Q9NZ94 848 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 CAPN11Q9UMQ6 739 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 RP1P56715 2156 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 ITPR1Q14643 2758 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 SRRM3A6NNA2 597 aaPredicted RBP10.13□□□□□ -0.79
HDLBP-228ENST00000459788 NEMP1O14524 444 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 TPP1O14773 563 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 SCAMP1O15126 338 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 DAPK3O43293 454 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 LRCH4O75427 683 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 PIAS2O75928 621 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 TM7SF2O76062 418 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 PAK4O96013 591 aaPredicted RBP10.13□□□□□ -0.79
HDLBP-228ENST00000459788 CSF2P04141 144 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 SERPING1P05155 500 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 UGT2B4P06133 528 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 GP1BAP07359 652 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 NME1P15531 152 aaKnown RBP10.13□□□□□ -0.79
HDLBP-228ENST00000459788 PRLRP16471 622 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 DGKAP23743 735 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 NFKBIAP25963 317 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 MIPP30301 263 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 HNRNPH3P31942 346 aaKnown RBP10.13□□□□□ -0.79
HDLBP-228ENST00000459788 PEX5P50542 639 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 DUSP3P51452 185 aaPredicted RBP10.13□□□□□ -0.79
HDLBP-228ENST00000459788 UBASH3AP57075 661 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 PFN3P60673 137 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 POLR2LP62875 67 aaKnown RBP10.13□□□□□ -0.79
HDLBP-228ENST00000459788 IL9RQ01113 521 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 IL10RBQ08334 325 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 BNIP3Q12983 259 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 CAMK2BQ13554 666 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 DPYSL2Q16555 572 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 RALGPS1Q5JS13 557 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 HGSNATQ68CP4 663 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 SEL1L3Q68CR1 1132 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 Q6ZSR6 202 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 RFX8Q6ZV50 586 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 TTC7BQ86TV6 843 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 PARGQ86W56 976 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 ZNF354CQ86Y25 554 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 EID2Q8N6I1 236 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 ARFGAP1Q8N6T3 406 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 OR13H1Q8NG92 308 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 CENPTQ96BT3 561 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 ZNF653Q96CK0 615 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 BMFQ96LC9 184 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 KLHL32Q96NJ5 620 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 SNRNP25Q9BV90 132 aaKnown RBP10.13□□□□□ -0.79
HDLBP-228ENST00000459788 MAGEB5Q9BZ81 275 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 KLC2Q9H0B6 622 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 SUV39H2Q9H5I1 410 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 DHX35Q9H5Z1 703 aaKnown RBP10.13□□□□□ -0.79
HDLBP-228ENST00000459788 KCTD5Q9NXV2 234 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 RCOR3Q9P2K3 495 aaPredicted RBP10.13□□□□□ -0.79
HDLBP-228ENST00000459788 LHX3Q9UBR4 397 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 IP6K2Q9UHH9 426 aa10.13□□□□□ -0.79
HDLBP-228ENST00000459788 LUC7L2Q9Y383 392 aaKnown RBP10.13□□□□□ -0.79
HDLBP-228ENST00000459788 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.13□□□□□ -0.793e-8■■□□□ 14.1
HDLBP-228ENST00000459788 ARHGEF17Q96PE2 2063 aaPredicted RBP10.12□□□□□ -0.79
HDLBP-228ENST00000459788 FAM170AA1A519 330 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 SYCE3A1L190 88 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 TMCO5BA8MYB1 307 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 H3BRJ5 948 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 RNF103O00237 685 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 LZTS3O60299 673 aaPredicted RBP10.12□□□□□ -0.79
HDLBP-228ENST00000459788 KRT37O76014 449 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 CKMT1AP12532 417 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 ERCC2P18074 760 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 SERPINA4P29622 427 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 SERPINB6P35237 376 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 ARL4AP40617 200 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 ABL2P42684 1182 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 AP1S1P61966 158 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 DPYSQ14117 519 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 TRIM14Q14142 442 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 FGL2Q14314 439 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 CYTH1Q15438 398 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 PRAMEF14Q5SWL7 426 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 ATXN7L2Q5T6C5 722 aaPredicted RBP10.12□□□□□ -0.79
HDLBP-228ENST00000459788 E4F1Q66K89 784 aaPredicted RBP10.12□□□□□ -0.79
HDLBP-228ENST00000459788 ERAP2Q6P179 960 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 CYP4V2Q6ZWL3 525 aaPredicted RBP10.12□□□□□ -0.79
HDLBP-228ENST00000459788 PTAR1Q7Z6K3 402 aaPredicted RBP10.12□□□□□ -0.79
HDLBP-228ENST00000459788 SLC22A18ASQ8N1D0 253 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 SLC25A45Q8N413 288 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 ATL2Q8NHH9 583 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 CXorf40AQ8TE69 158 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 GRAMD1AQ96CP6 724 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 PSKH2Q96QS6 385 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 KCTD15Q96SI1 283 aaPredicted RBP10.12□□□□□ -0.79
HDLBP-228ENST00000459788 CALN1Q9BXU9 219 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 NRSN2Q9GZP1 204 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 ATP13A3Q9H7F0 1226 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 SCUBE2Q9NQ36 999 aa10.12□□□□□ -0.79
HDLBP-228ENST00000459788 LAMA5O15230 3695 aa10.11□□□□□ -0.79
HDLBP-228ENST00000459788 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.11□□□□□ -0.79
HDLBP-228ENST00000459788 POM121BA6NF01 834 aa10.11□□□□□ -0.79
HDLBP-228ENST00000459788 IGLON5A6NGN9 336 aa10.11□□□□□ -0.79
HDLBP-228ENST00000459788 SPINT1O43278 529 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms