RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 EXOC2Q96KP1 924 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 BRD8Q9H0E9 1235 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 ANKRD6Q9Y2G4 727 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 HYOU1Q9Y4L1 999 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 CEP192Q8TEP8 1941 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 A0A1B0GVT2 93 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 GOLGA6L3A6NEY3 463 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 MFSD11O43934 449 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 MAT2AP31153 395 aaKnown RBP16.33■□□□□ 0.2
CD28-203ENST00000458610 AKT2P31751 481 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 NR2C2P49116 596 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 PPP2CBP62714 309 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 PPP2CAP67775 309 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 GRIK2Q13002 908 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 PDK1Q15118 436 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 UAP1L1Q3KQV9 507 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 SLC9A4Q6AI14 798 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 ERAP2Q6P179 960 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 DGLUCYQ7Z3D6 616 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 IQCHQ86VS3 1027 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 KATNAL2Q8IYT4 538 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 MINDY1Q8N5J2 469 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 MFSD2AQ8NA29 543 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 CCNYQ8ND76 341 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 ACRBPQ8NEB7 543 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 ASB12Q8WXK4 309 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 NUDCD1Q96RS6 583 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 ORAI3Q9BRQ5 295 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 SCUBE2Q9NQ36 999 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 DNAAF2Q9NVR5 837 aaKnown RBP16.33■□□□□ 0.2
CD28-203ENST00000458610 TFR2Q9UP52 801 aa16.33■□□□□ 0.2
CD28-203ENST00000458610 REXO2Q9Y3B8 237 aaKnown RBP16.33■□□□□ 0.2
CD28-203ENST00000458610 CCDC66A2RUB6 948 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 C3orf70A6NLC5 250 aaPredicted RBP16.32■□□□□ 0.2
CD28-203ENST00000458610 RNF103O00237 685 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 INSIG1O15503 277 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 ARHGAP6O43182 974 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 PEX11BO96011 259 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 TIMP2P16035 220 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 COPS2P61201 443 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 SUZ12Q15022 739 aaKnown RBP16.32■□□□□ 0.2
CD28-203ENST00000458610 UGP2Q16851 508 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 ZNF284Q2VY69 593 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 TFDP3Q5H9I0 405 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 CCDC13Q8IYE1 715 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 TEX26Q8N6G2 289 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 EXD1Q8NHP7 514 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 HDAC11Q96DB2 347 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 SLC6A18Q96N87 628 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 C1QTNF7Q9BXJ2 289 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 SLC17A9Q9BYT1 436 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 TSGA10Q9BZW7 698 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 EBF2Q9HAK2 575 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 HEY1Q9Y5J3 304 aa16.32■□□□□ 0.2
CD28-203ENST00000458610 TNRC6BQ9UPQ9 1833 aaKnown RBP16.31■□□□□ 0.2
CD28-203ENST00000458610 TSPAN11A1L157 253 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 RCCD1A6NED2 376 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 PPP1R12AO14974 1030 aaPredicted RBP16.31■□□□□ 0.2
CD28-203ENST00000458610 AREL1O15033 823 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 SLC31A1O15431 190 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 SOCS5O75159 536 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 PIGNO95427 931 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 ZNF883P0CG24 379 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 KRT10P13645 584 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 HNRNPA2B1P22626 353 aaKnown RBP16.31■□□□□ 0.2
CD28-203ENST00000458610 CDKN2BP42772 138 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 GBE1Q04446 702 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 ITKQ08881 620 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 KIF19Q2TAC6 998 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 HLA-BQ31612 363 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 TMEM259Q4ZIN3 620 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 MFSD7Q6UXD7 560 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 SPOCD1Q6ZMY3 1216 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 ERMP1Q7Z2K6 904 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 CAMK1DQ8IU85 385 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 CCDC50Q8IVM0 306 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 NDUFAF2Q8N183 169 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 RNF10Q8N5U6 811 aaKnown RBP16.31■□□□□ 0.2
CD28-203ENST00000458610 PLD5Q8N7P1 536 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 CXorf40AQ8TE69 158 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 MAML1Q92585 1016 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 ANP32BQ92688 251 aaKnown RBP16.31■□□□□ 0.2
CD28-203ENST00000458610 KLHDC7BQ96G42 594 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 MGME1Q9BQP7 344 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 C1QTNF2Q9BXJ5 285 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 POLR1EQ9GZS1 481 aaKnown RBP16.31■□□□□ 0.2
CD28-203ENST00000458610 LACRTQ9GZZ8 138 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 SLC32A1Q9H598 525 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 GAREM1Q9H706 876 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 GRPEL1Q9HAV7 217 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 FSCN3Q9NQT6 498 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 RBM22Q9NW64 420 aaKnown RBP eCLIP16.31■□□□□ 0.2
CD28-203ENST00000458610 DTLQ9NZJ0 730 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 AMFRQ9UKV5 643 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 PCDHA3Q9Y5H8 950 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 HS3ST3A1Q9Y663 406 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 DUSP10Q9Y6W6 482 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 NUMA1Q14980 2115 aa16.31■□□□□ 0.2
CD28-203ENST00000458610 UPK3BL1B0FP48 263 aa16.3■□□□□ 0.2
CD28-203ENST00000458610 UPK3BL2E5RIL1 263 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms