RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.18□□□□□ -0.78
ATG4A-206ENST00000457035 TCRBV7S2A1N4TA0A589 114 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 TTC24A2A3L6 582 aaPredicted RBP10.17□□□□□ -0.78
ATG4A-206ENST00000457035 C16orf96A6NNT2 1141 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 METTL12A8MUP2 240 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 KCNK1O00180 336 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 KPNA3O00505 521 aaPredicted RBP10.17□□□□□ -0.78
ATG4A-206ENST00000457035 PPP1R12AO14974 1030 aaPredicted RBP10.17□□□□□ -0.78
ATG4A-206ENST00000457035 SLC7A4O43246 635 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 NDUFS2O75306 463 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 RHOBTB1O94844 696 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 TJP3O95049 919 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 JCHAINP01591 159 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 UGT2B4P06133 528 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 ITGB7P26010 798 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 HSPA9P38646 679 aaKnown RBP10.17□□□□□ -0.78
ATG4A-206ENST00000457035 PTGER3P43115 390 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 TAS2R38P59533 333 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 MAXP61244 160 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 IFI35P80217 286 aaPredicted RBP10.17□□□□□ -0.78
ATG4A-206ENST00000457035 RPL6Q02878 288 aaKnown RBP10.17□□□□□ -0.78
ATG4A-206ENST00000457035 AP1B1Q10567 949 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 XRCC4Q13426 336 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 ZNF235Q14590 738 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 IHHQ14623 411 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 GRM3Q14832 879 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 PRKD1Q15139 912 aaPredicted RBP10.17□□□□□ -0.78
ATG4A-206ENST00000457035 LPAL2Q16609 132 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 FAM182AQ5T1J6 154 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 PIP5KL1Q5T9C9 394 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 AGBL4Q5VU57 503 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 ALG1LQ6GMV1 187 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 GDPD4Q6W3E5 623 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 ERN2Q76MJ5 926 aaKnown RBP10.17□□□□□ -0.78
ATG4A-206ENST00000457035 LPCAT2Q7L5N7 544 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 ZC3H18Q86VM9 953 aaKnown RBP10.17□□□□□ -0.78
ATG4A-206ENST00000457035 CAMK1DQ8IU85 385 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 SLC41A1Q8IVJ1 513 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 BBS5Q8N3I7 341 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 DEFB119Q8N690 84 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 TTC13Q8NBP0 860 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 CADM4Q8NFZ8 388 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 ACTL9Q8TC94 416 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 HCAR2Q8TDS4 363 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 GANCQ8TET4 914 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 HAUS1Q96CS2 278 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 LOXL4Q96JB6 756 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 ZNF641Q96N77 438 aaPredicted RBP10.17□□□□□ -0.78
ATG4A-206ENST00000457035 KLHL32Q96NJ5 620 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 NUDCD1Q96RS6 583 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 TUBGCP5Q96RT8 1024 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 OSBPL1AQ9BXW6 950 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 SUV39H2Q9H5I1 410 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 C6orf106Q9H6K1 298 aaPredicted RBP10.17□□□□□ -0.78
ATG4A-206ENST00000457035 NOD2Q9HC29 1040 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 NT5MQ9NPB1 228 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 KCND1Q9NSA2 647 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 DKK3Q9UBP4 350 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 AMACRQ9UHK6 382 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 SMG5Q9UPR3 1016 aaKnown RBP10.17□□□□□ -0.78
ATG4A-206ENST00000457035 ATP8A1Q9Y2Q0 1164 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 JRKLQ9Y4A0 524 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 ADAMTS9Q9P2N4 1935 aa10.17□□□□□ -0.78
ATG4A-206ENST00000457035 ASCC3Q8N3C0 2202 aaKnown RBP10.17□□□□□ -0.78
ATG4A-206ENST00000457035 TDRD6O60522 2096 aaKnown RBP10.16□□□□□ -0.78
ATG4A-206ENST00000457035 HACD1B0YJ81 288 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 TRAFD1O14545 582 aaPredicted RBP10.16□□□□□ -0.78
ATG4A-206ENST00000457035 PLRG1O43660 514 aaKnown RBP10.16□□□□□ -0.78
ATG4A-206ENST00000457035 PIGNO95427 931 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 SEMA4FO95754 770 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 HLA-DQB2P05538 268 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 TIMP2P16035 220 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 ADPRHP54922 357 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 AP1S1P61966 158 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 OTUD4Q01804 1114 aaKnown RBP10.16□□□□□ -0.78
ATG4A-206ENST00000457035 CCDC15Q0P6D6 951 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 WASHC5Q12768 1159 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 ZBTB17Q13105 803 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 PUM1Q14671 1186 aaKnown RBP eCLIP10.16□□□□□ -0.78
ATG4A-206ENST00000457035 NOMO1Q15155 1222 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 ELF2Q15723 593 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 RSPO4Q2I0M5 234 aaPredicted RBP10.16□□□□□ -0.78
ATG4A-206ENST00000457035 TEX44Q53QW1 395 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 RALGPS1Q5JS13 557 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 ZNF569Q5MCW4 686 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 LAIR1Q6GTX8 287 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 SLC13A5Q86YT5 568 aaPredicted RBP10.16□□□□□ -0.78
ATG4A-206ENST00000457035 SLC35F6Q8N357 371 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 OR14C36Q8NHC7 312 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 ARRDC2Q8TBH0 407 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 TFB1MQ8WVM0 346 aaKnown RBP10.16□□□□□ -0.78
ATG4A-206ENST00000457035 DNASE2BQ8WZ79 361 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 ECHDC3Q96DC8 303 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 PPP1R16AQ96I34 528 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 PCED1AQ9H1Q7 454 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 CARD9Q9H257 536 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 KDM4CQ9H3R0 1056 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 C10orf88Q9H8K7 445 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 RAB23Q9ULC3 237 aa10.16□□□□□ -0.78
ATG4A-206ENST00000457035 PCNX2A6NKB5 2137 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms