RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 KLC2Q9H0B6 622 aa17.99■□□□□ 0.47
COPS7A-202ENST00000455113 DDX56Q9NY93 547 aaKnown RBP17.99■□□□□ 0.47
COPS7A-202ENST00000455113 NEMP1O14524 444 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 LATO43561 262 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 PRAMEF11O60813 436 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 RNGTTO60942 597 aaKnown RBP17.98■□□□□ 0.47
COPS7A-202ENST00000455113 KCNK5O95279 499 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 KRT1P04264 644 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 ADRB3P13945 408 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 TCP1P17987 556 aaKnown RBP17.98■□□□□ 0.47
COPS7A-202ENST00000455113 CSRP1P21291 193 aaKnown RBP17.98■□□□□ 0.47
COPS7A-202ENST00000455113 DPYSQ14117 519 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 STAT4Q14765 748 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 HLA-BQ31612 363 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 ATXN7L2Q5T6C5 722 aaPredicted RBP17.98■□□□□ 0.47
COPS7A-202ENST00000455113 KCTD6Q8NC69 237 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 OR2I1PQ8NGU4 316 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 RAB7BQ96AH8 199 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 SLC6A18Q96N87 628 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 CSPG4P5Q96PW8 444 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 CARD9Q9H257 536 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 RRAGDQ9NQL2 400 aaPredicted RBP17.98■□□□□ 0.47
COPS7A-202ENST00000455113 RCOR3Q9P2K3 495 aaPredicted RBP17.98■□□□□ 0.47
COPS7A-202ENST00000455113 J3KR12 359 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 VILLO15195 856 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 MAGEC1O60732 1142 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 URI1O94763 535 aaPredicted RBP17.98■□□□□ 0.47
COPS7A-202ENST00000455113 ZRANB2O95218 330 aaKnown RBP eCLIP17.98■□□□□ 0.47
COPS7A-202ENST00000455113 UGT2B4P06133 528 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 PYGMP11217 842 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 CEACAM1P13688 526 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 ZNF211Q13398 564 aaPredicted RBP17.98■□□□□ 0.47
COPS7A-202ENST00000455113 RFTN1Q14699 578 aaPredicted RBP17.98■□□□□ 0.47
COPS7A-202ENST00000455113 SUZ12Q15022 739 aaKnown RBP17.98■□□□□ 0.47
COPS7A-202ENST00000455113 CFAP58Q5T655 872 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 NAPEPLDQ6IQ20 393 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 PSAPL1Q6NUJ1 521 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 GDPD4Q6W3E5 623 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 EXD1Q8NHP7 514 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 COG1Q8WTW3 980 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 NSMCE1Q8WV22 266 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 RAPGEF5Q92565 580 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 FEM1CQ96JP0 617 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 CINPQ9BW66 212 aaPredicted RBP17.98■□□□□ 0.47
COPS7A-202ENST00000455113 CALN1Q9BXU9 219 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 PCDH18Q9HCL0 1135 aa17.98■□□□□ 0.47
COPS7A-202ENST00000455113 PLXNA2O75051 1894 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 LRRD1A4D1F6 860 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 C16orf96A6NNT2 1141 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 PRAMEF26H0Y7S4 382 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 DFNA5O60443 496 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 XPAP23025 273 aaPredicted RBP17.97■□□□□ 0.47
COPS7A-202ENST00000455113 AMPD1P23109 780 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 GKP32189 559 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 TAS2R38P59533 333 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 IL10RBQ08334 325 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 PDK2Q15119 407 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 KIF19Q2TAC6 998 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 ODF2Q5BJF6 829 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 RCOR2Q8IZ40 523 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 BBS5Q8N3I7 341 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 NPWQ8N729 165 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 PAF1Q8N7H5 531 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 RNF25Q96BH1 459 aaPredicted RBP17.97■□□□□ 0.47
COPS7A-202ENST00000455113 PBKQ96KB5 322 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 KLHL32Q96NJ5 620 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 ORAI3Q9BRQ5 295 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 EBF2Q9HAK2 575 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 PDFQ9HBH1 243 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 TM7SF3Q9NS93 570 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 IPO11Q9UI26 975 aaKnown RBP17.97■□□□□ 0.47
COPS7A-202ENST00000455113 MFHAS1Q9Y4C4 1052 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 PCDHB9Q9Y5E1 797 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 SNX11Q9Y5W9 270 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 SLCO1B1Q9Y6L6 691 aa17.97■□□□□ 0.47
COPS7A-202ENST00000455113 ASCC3Q8N3C0 2202 aaKnown RBP17.97■□□□□ 0.47
COPS7A-202ENST00000455113 A0A1W2PQU0 124 aa17.96■□□□□ 0.47
COPS7A-202ENST00000455113 UPK3BL1B0FP48 263 aa17.96■□□□□ 0.47
COPS7A-202ENST00000455113 UPK3BL2E5RIL1 263 aa17.96■□□□□ 0.47
COPS7A-202ENST00000455113 ZNF185O15231 689 aa17.96■□□□□ 0.47
COPS7A-202ENST00000455113 KDELR1P24390 212 aa17.96■□□□□ 0.47
COPS7A-202ENST00000455113 RENBPP51606 427 aa17.96■□□□□ 0.47
COPS7A-202ENST00000455113 RPS21P63220 83 aaKnown RBP17.96■□□□□ 0.47
COPS7A-202ENST00000455113 HNRNPDQ14103 355 aaKnown RBP17.96■□□□□ 0.47
COPS7A-202ENST00000455113 AFMIDQ63HM1 303 aa17.96■□□□□ 0.47
COPS7A-202ENST00000455113 KIAA1161Q6NSJ0 714 aa17.96■□□□□ 0.47
COPS7A-202ENST00000455113 AADACL2Q6P093 401 aa17.96■□□□□ 0.47
COPS7A-202ENST00000455113 LAYNQ6UX15 382 aa17.96■□□□□ 0.47
COPS7A-202ENST00000455113 PARS2Q7L3T8 475 aaKnown RBP17.96■□□□□ 0.47
COPS7A-202ENST00000455113 TTC7BQ86TV6 843 aa17.96■□□□□ 0.47
COPS7A-202ENST00000455113 HORMAD1Q86X24 394 aa17.96■□□□□ 0.47
COPS7A-202ENST00000455113 CCDC50Q8IVM0 306 aa17.96■□□□□ 0.47
COPS7A-202ENST00000455113 RBM41Q96IZ5 413 aaKnown RBP17.96■□□□□ 0.47
COPS7A-202ENST00000455113 EXOC2Q96KP1 924 aa17.96■□□□□ 0.47
COPS7A-202ENST00000455113 CPEB1Q9BZB8 566 aaKnown RBP17.96■□□□□ 0.47
COPS7A-202ENST00000455113 C3orf70A6NLC5 250 aaPredicted RBP17.95■□□□□ 0.46
COPS7A-202ENST00000455113 CEP104O60308 925 aa17.95■□□□□ 0.46
COPS7A-202ENST00000455113 CD48P09326 243 aa17.95■□□□□ 0.46
COPS7A-202ENST00000455113 ZNF883P0CG24 379 aa17.95■□□□□ 0.46
COPS7A-202ENST00000455113 ARSEP51690 589 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms