RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 RPS24P62847 133 aaKnown RBP6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 RAD51Q06609 339 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 ZNF77Q15935 545 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 AARS2Q5JTZ9 985 aaKnown RBP6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 LYPLAL1Q5VWZ2 237 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 TXNDC8Q6A555 127 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 MRNIPQ6NTE8 343 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 RFWD3Q6PCD5 774 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 NCEH1Q6PIU2 408 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 CPLX4Q7Z7G2 160 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 PCDH20Q8N6Y1 951 aaKnown RBP6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 C2CD4AQ8NCU7 369 aaPredicted RBP6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 LRRC8CQ8TDW0 803 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 MICAL1Q8TDZ2 1067 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 AUTS2Q8WXX7 1259 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 LMLNQ96KR4 655 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 ZNF641Q96N77 438 aaPredicted RBP6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 TSNARE1Q96NA8 513 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 SLC46A2Q9BY10 475 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 MAGEE1Q9HCI5 957 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 GKN1Q9NS71 199 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 RAD18Q9NS91 495 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 C20orf96Q9NUD7 363 aaPredicted RBP6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 TBK1Q9UHD2 729 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 FBXO10Q9UK96 956 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 SLC8A2Q9UPR5 921 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 ATG2AQ2TAZ0 1938 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 HIDE1A8MVS5 230 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 HOXC11O43248 304 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 PMPCBO75439 489 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 BANF1O75531 89 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 IGSF6O95976 241 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 SRPRAP08240 638 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 ATXN1LP0C7T5 689 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 MYL4P12829 197 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 DRD4P21917 467 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 SERPINB5P36952 375 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 ACVRL1P37023 503 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 ETV4P43268 484 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 LEPRP48357 1165 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 GYS2P54840 703 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 ADARP55265 1226 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 SNRPD1P62314 119 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 ITKQ08881 620 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 KCNC3Q14003 757 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 CYTH1Q15438 398 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 CRY1Q16526 586 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 TAF1BQ53T94 588 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 SIRPB2Q5JXA9 342 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 CERCAMQ5T4B2 595 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 UBAP2Q5T6F2 1119 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 TMCO2Q7Z6W1 182 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 SDCCAG8Q86SQ7 713 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 SRLQ86TD4 932 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 CACNA2D3Q8IZS8 1091 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 PGBD5Q8N414 524 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 MAB21L3Q8N8X9 362 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 SH3RF2Q8TEC5 729 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 ZNF473Q8WTR7 871 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 DDI1Q8WTU0 396 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 CCDC126Q96EE4 140 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 LYSMD1Q96S90 227 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 TDRD1Q9BXT4 1180 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 STN1Q9H668 368 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 NLE1Q9NVX2 485 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 CTNNAL1Q9UBT7 734 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 VPS28Q9UK41 221 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 TMCO1Q9UM00 188 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 SLC27A6Q9Y2P4 619 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 PPIL1Q9Y3C6 166 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 MYLKQ15746 1914 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 A0A1W2PRU2 124 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 CXorf49A8MYA2 514 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 WASH3PC4AMC7 463 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 HTRA2O43464 458 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 MOSPD3O75425 235 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 RPP40O75818 363 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 TMCC1O94876 653 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 ADH1CP00326 375 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 CA8P35219 290 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 ARF5P84085 180 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 CAMK1Q14012 370 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 PDGFRLQ15198 375 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 PLEKHG6Q3KR16 790 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 HP1BP3Q5SSJ5 553 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 NEPROQ6NW34 567 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 TRMT10BQ6PF06 316 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 CERS6Q6ZMG9 384 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 STRA8Q7Z7C7 330 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 TNS4Q8IZW8 715 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 AHI1Q8N157 1196 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 STK40Q8N2I9 435 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 CBARPQ8N350 705 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 TAB3Q8N5C8 712 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 SPATA22Q8NHS9 363 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 USP33Q8TEY7 942 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 IRF7Q92985 503 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 VPS39Q96JC1 886 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 FCRL3Q96P31 734 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms