RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 GANQ9H2C0 597 aa11.84□□□□□ -0.51
GARNL3-210ENST00000453030 SPASTQ9UBP0 616 aa11.84□□□□□ -0.51
GARNL3-210ENST00000453030 ENTPD2Q9Y5L3 495 aa11.84□□□□□ -0.51
GARNL3-210ENST00000453030 MYO18BQ8IUG5 2567 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 C2CD4BA6NLJ0 364 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 AREL1O15033 823 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 BUB1O43683 1085 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 LZTS3O60299 673 aaPredicted RBP11.83□□□□□ -0.52
GARNL3-210ENST00000453030 TM7SF2O76062 418 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 POP4O95707 220 aaKnown RBP11.83□□□□□ -0.52
GARNL3-210ENST00000453030 IGSF6O95976 241 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 CYP1A1P04798 512 aaPredicted RBP11.83□□□□□ -0.52
GARNL3-210ENST00000453030 ANXA6P08133 673 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 CELA2BP08218 269 aaPredicted RBP11.83□□□□□ -0.52
GARNL3-210ENST00000453030 PLEKP08567 350 aaPredicted RBP11.83□□□□□ -0.52
GARNL3-210ENST00000453030 ITIH2P19823 946 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 MMP8P22894 467 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 ADKP55263 362 aaKnown RBP11.83□□□□□ -0.52
GARNL3-210ENST00000453030 HDAC4P56524 1084 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 RHOAP61586 193 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 CDR2Q01850 454 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 PTK2BQ14289 1009 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 IRF4Q15306 451 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 KLHL40Q2TBA0 621 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 MYLK3Q32MK0 819 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 TCP11X2Q5H9J9 407 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 C6orf132Q5T0Z8 1188 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 FAXCQ5TGI0 409 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 GDPD4Q6W3E5 623 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 MACC1Q6ZN28 852 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 ZNF605Q86T29 641 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 ZNF677Q86XU0 584 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 PLPP6Q8IY26 295 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 BTN2A2Q8WVV5 523 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 ASB12Q8WXK4 309 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 GLMNQ92990 594 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 VOPP1Q96AW1 172 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 EPAS1Q99814 870 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 BOCQ9BWV1 1114 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 SLC13A1Q9BZW2 595 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 MAGEH1Q9H213 219 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 NLRC4Q9NPP4 1024 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 MBNL1Q9NR56 388 aaKnown RBP11.83□□□□□ -0.52
GARNL3-210ENST00000453030 FAM207AQ9NSI2 230 aaPredicted RBP11.83□□□□□ -0.52
GARNL3-210ENST00000453030 WDR70Q9NW82 654 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 SIRPGQ9P1W8 387 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 DACH1Q9UI36 760 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 SALL4Q9UJQ4 1053 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 COQ6Q9Y2Z9 468 aa11.83□□□□□ -0.52
GARNL3-210ENST00000453030 CXorf51AA0A1B0GTR3 108 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 LMO7DNF2Z398 122 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 TPP1O14773 563 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 PIGNO95427 931 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 TSHRP16473 764 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 CHRNB2P17787 502 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 ERCC5P28715 1186 aaPredicted RBP11.82□□□□□ -0.52
GARNL3-210ENST00000453030 EIF4A3P38919 411 aaKnown RBP11.82□□□□□ -0.52
GARNL3-210ENST00000453030 PTPN9P43378 593 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 RPIAP49247 311 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 PDX1P52945 283 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 POLR2FP61218 127 aaKnown RBP11.82□□□□□ -0.52
GARNL3-210ENST00000453030 RHDQ02161 417 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 SPIDRQ14159 915 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 STRADAQ7RTN6 431 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 TTC7BQ86TV6 843 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 PYROXD2Q8N2H3 581 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 KYQ8NBH2 561 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 TP53I13Q8NBR0 393 aaPredicted RBP11.82□□□□□ -0.52
GARNL3-210ENST00000453030 PCDH19Q8TAB3 1148 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 NAT6Q93015 286 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 CENPTQ96BT3 561 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 NCAPGQ9BPX3 1015 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 CCDC3Q9BQI4 270 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 C1QTNF7Q9BXJ2 289 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 SEMA4CQ9C0C4 833 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 CLPBQ9H078 707 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 KLC2Q9H0B6 622 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 NUP62CLQ9H1M0 184 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 VPS16Q9H269 839 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 DOLKQ9UPQ8 538 aa11.82□□□□□ -0.52
GARNL3-210ENST00000453030 BSNQ9UPA5 3926 aa11.81□□□□□ -0.52
GARNL3-210ENST00000453030 ZSCAN5CA6NGD5 496 aaPredicted RBP11.81□□□□□ -0.52
GARNL3-210ENST00000453030 EPHB6O15197 1021 aa11.81□□□□□ -0.52
GARNL3-210ENST00000453030 YY2O15391 372 aa11.81□□□□□ -0.52
GARNL3-210ENST00000453030 KDELR3O43731 214 aa11.81□□□□□ -0.52
GARNL3-210ENST00000453030 TCEA3O75764 348 aa11.81□□□□□ -0.52
GARNL3-210ENST00000453030 KRT3P12035 628 aa11.81□□□□□ -0.52
GARNL3-210ENST00000453030 GPD1P21695 349 aa11.81□□□□□ -0.52
GARNL3-210ENST00000453030 XPAP23025 273 aaPredicted RBP11.81□□□□□ -0.52
GARNL3-210ENST00000453030 EEF1GP26641 437 aaKnown RBP11.81□□□□□ -0.52
GARNL3-210ENST00000453030 EPHB2P29323 1055 aa11.81□□□□□ -0.52
GARNL3-210ENST00000453030 SOX5P35711 763 aa11.81□□□□□ -0.52
GARNL3-210ENST00000453030 NSFP46459 744 aaKnown RBP11.81□□□□□ -0.52
GARNL3-210ENST00000453030 YPEL5P62699 121 aa11.81□□□□□ -0.52
GARNL3-210ENST00000453030 PPARDQ03181 441 aa11.81□□□□□ -0.52
GARNL3-210ENST00000453030 RAD51Q06609 339 aa11.81□□□□□ -0.52
GARNL3-210ENST00000453030 VAC14Q08AM6 782 aa11.81□□□□□ -0.52
GARNL3-210ENST00000453030 LY6DQ14210 128 aa11.81□□□□□ -0.52
GARNL3-210ENST00000453030 EFHC2Q5JST6 749 aa11.81□□□□□ -0.52
GARNL3-210ENST00000453030 ESRP1Q6NXG1 681 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms