RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 DPYSL2Q16555 572 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 ZNF423Q2M1K9 1284 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 CARD16Q5EG05 197 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 PIP5KL1Q5T9C9 394 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 SEL1L2Q5TEA6 688 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 TXNRD3NBQ6F5E7 133 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 CYP4V2Q6ZWL3 525 aaPredicted RBP17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 VSIG1Q86XK7 387 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 ZNF354CQ86Y25 554 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 CCDC50Q8IVM0 306 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 KRT35Q92764 455 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 WDR24Q96S15 920 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 MYOCQ99972 504 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 TLR10Q9BXR5 811 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 TM6SF2Q9BZW4 377 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 KDM4CQ9H3R0 1056 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 DYRK4Q9NR20 520 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 GPATCH2LQ9NWQ4 482 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 KLK13Q9UKR3 277 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 CA5BQ9Y2D0 317 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 PCDHGB2Q9Y5G2 931 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 WASF2Q9Y6W5 498 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 GOLGA8CPA6NN73 597 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 DAPK3O43293 454 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 PRNPP04156 253 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 FTH1P19P0C7X4 201 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 TCP1P17987 556 aaKnown RBP17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 EPHB2P29323 1055 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 GKP32189 559 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 CCT8P50990 548 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 SUZ12Q15022 739 aaKnown RBP17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 POLD3Q15054 466 aaPredicted RBP17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 ST3GAL2Q16842 350 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 ATP13A4Q4VNC1 1196 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 PPP6R3Q5H9R7 873 aaPredicted RBP17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 DBX2Q6ZNG2 339 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 SLCO6A1Q86UG4 719 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 RYBPQ8N488 228 aaPredicted RBP17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 PCDH20Q8N6Y1 951 aaKnown RBP17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 NETO2Q8NC67 525 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 OR6K2Q8NGY2 324 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 SKA1Q96BD8 255 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 PBKQ96KB5 322 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 HEPHQ9BQS7 1158 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 CALN1Q9BXU9 219 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 MAK16Q9BXY0 300 aaKnown RBP17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 CEP44Q9C0F1 390 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 MAGEH1Q9H213 219 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 CARD9Q9H257 536 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 DONSONQ9NYP3 566 aa17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 RCOR3Q9P2K3 495 aaPredicted RBP17.3■□□□□ 0.36
PRPF40A-204ENST00000450303 A0A1W2PQU0 124 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 ZNF487B1APH4 448 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 EEF2KO00418 725 aaKnown RBP17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 SLC31A1O15431 190 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 FLRT2O43155 660 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 RAMP2O60895 175 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 ATP1A1P05023 1023 aaKnown RBP17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 PRLRP16471 622 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 ETFBP38117 255 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 HCAR3P49019 387 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 CCNHP51946 323 aaPredicted RBP17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 TPI1P60174 286 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 NAPEPLDQ6IQ20 393 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 ERN2Q76MJ5 926 aaKnown RBP17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 TRIM69Q86WT6 500 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 GATAD2AQ86YP4 633 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 FAM71BQ8TC56 605 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 RNF25Q96BH1 459 aaPredicted RBP17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 KCTD15Q96SI1 283 aaPredicted RBP17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 ELF4Q99607 663 aaPredicted RBP17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 ZNF670Q9BS34 389 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 KLC2Q9H0B6 622 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 NOL6Q9H6R4 1146 aaKnown RBP17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 ZDHHC6Q9H6R6 413 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 CATSPERBQ9H7T0 1116 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 PCDH18Q9HCL0 1135 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 PREBQ9HCU5 417 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 KLHL11Q9NVR0 708 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 HECAQ9UBI9 543 aaPredicted RBP17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 HPCAL4Q9UM19 191 aa17.29■□□□□ 0.36
PRPF40A-204ENST00000450303 CEP295Q9C0D2 2601 aa17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 A0A1B0GTQ1 180 aa17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 TLR4O00206 839 aa17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 KDELR3O43731 214 aa17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 PCDH8O95206 1070 aa17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 ATXN1LP0C7T5 689 aaKnown RBP17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 MARCKSL1P49006 195 aa17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 SHBQ15464 509 aa17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 CA9Q16790 459 aa17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 SLC45A4Q5BKX6 768 aa17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 TFDP3Q5H9I0 405 aa17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 PAPD7Q5XG87 772 aaKnown RBP17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 RTL3Q8N8U3 475 aaKnown RBP17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 ANKRD7Q92527 254 aa17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 RAPGEF5Q92565 580 aa17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 ALG3Q92685 438 aa17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 RETREG1Q9H6L5 497 aa17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 GDF3Q9NR23 364 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms