RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 SLC12A4Q9UP95 1085 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 HS3ST2Q9Y278 367 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 R3HDM2Q9Y2K5 976 aaKnown RBP10□□□□□ -0.81
CCDC171-203ENST00000449575 FANCMQ8IYD8 2048 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 ZNF487B1APH4 448 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 MUSKO15146 869 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 TIMM44O43615 452 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 PRAMEF11O60813 436 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 SIN3BO75182 1162 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 GKP32189 559 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 GARSP41250 739 aaKnown RBP10□□□□□ -0.81
CCDC171-203ENST00000449575 RGRP47804 291 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 SERPINH1P50454 418 aaKnown RBP10□□□□□ -0.81
CCDC171-203ENST00000449575 METAP1P53582 386 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 NRLP54845 237 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 SLC10A7Q0GE19 358 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 GALNT2Q10471 571 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 BYSLQ13895 437 aaKnown RBP10□□□□□ -0.81
CCDC171-203ENST00000449575 PPP2R5EQ16537 467 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 SYT13Q7L8C5 426 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 VSIG1Q86XK7 387 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 SPEM1Q8N4L4 309 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 DTWD2Q8NBA8 298 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 OR6K2Q8NGY2 324 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 MS4A14Q96JA4 679 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 NSMCE3Q96MG7 304 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 CEP41Q9BYV8 373 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 PRSS16Q9NQE7 514 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 SLC25A13Q9UJS0 675 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 ARHGAP42A6NI28 874 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 K7ESF4 209 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 ASLP04424 464 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 SRPRAP08240 638 aaKnown RBP9.99□□□□□ -0.81
CCDC171-203ENST00000449575 KLF1Q13351 362 aaPredicted RBP9.99□□□□□ -0.81
CCDC171-203ENST00000449575 CYTH1Q15438 398 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 SPRED3Q2MJR0 410 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 ATXN7L2Q5T6C5 722 aaPredicted RBP9.99□□□□□ -0.81
CCDC171-203ENST00000449575 C9orf64Q5T6V5 341 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 BBS12Q6ZW61 710 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 ZC3H18Q86VM9 953 aaKnown RBP9.99□□□□□ -0.81
CCDC171-203ENST00000449575 LZTR1Q8N653 840 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 OLFM3Q96PB7 478 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 BPTFQ12830 3046 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 ENO4A6NNW6 628 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 ATP9BO43861 1147 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 TMCC1O94876 653 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 DRD4P21917 467 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 SERPINB6P35237 376 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 COPAP53621 1224 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 SULT2A1Q06520 285 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 HNRNPA1L2Q32P51 320 aaKnown RBP9.99□□□□□ -0.81
CCDC171-203ENST00000449575 HEATR6Q6AI08 1181 aaKnown RBP9.99□□□□□ -0.81
CCDC171-203ENST00000449575 C22orf39Q6P5X5 142 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 C1orf210Q8IVY1 113 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 PGBD5Q8N414 524 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 ATPAF2Q8N5M1 289 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 FRMD1Q8N878 549 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 CHST14Q8NCH0 376 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 MDGA1Q8NFP4 955 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 ACTL9Q8TC94 416 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 CASKIN2Q8WXE0 1202 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 SP110Q9HB58 689 aa9.99□□□□□ -0.81
CCDC171-203ENST00000449575 THADAQ6YHU6 1953 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 LRRK1Q38SD2 2015 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 TCRBV21S2A2A0A5A6 115 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 A6NHS1 94 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 KCNK1O00180 336 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 PEX14O75381 377 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 HSD17B3P37058 310 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 CXCL12P48061 93 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 COPS2P61201 443 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 ST8SIA6P61647 398 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 OTUD4Q01804 1114 aaKnown RBP9.98□□□□□ -0.81
CCDC171-203ENST00000449575 ROR2Q01974 943 aaKnown RBP9.98□□□□□ -0.81
CCDC171-203ENST00000449575 POM121L1PQ3SYA9 428 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 ANO7Q6IWH7 933 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 RETSATQ6NUM9 610 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 STK40Q8N2I9 435 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.98□□□□□ -0.81
CCDC171-203ENST00000449575 DRAXINQ8NBI3 349 aaPredicted RBP9.98□□□□□ -0.81
CCDC171-203ENST00000449575 CCNYQ8ND76 341 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 OR2A12Q8NGT7 310 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 KCNV2Q8TDN2 545 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 ATG4AQ8WYN0 398 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 C1QTNF1Q9BXJ1 281 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 TPSD1Q9BZJ3 242 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 SARDHQ9UL12 918 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 PLK4O00444 970 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 INSIG1O15503 277 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 CTSLP07711 333 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 GABRG2P18507 467 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 PTPN7P35236 360 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 CCNG1P51959 295 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 MAXP61244 160 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 MRPS25P82663 173 aaKnown RBP9.98□□□□□ -0.81
CCDC171-203ENST00000449575 IL10RBQ08334 325 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 CAMK2GQ13555 558 aaPredicted RBP9.98□□□□□ -0.81
CCDC171-203ENST00000449575 TFDP2Q14188 446 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 IHHQ14623 411 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 EOGTQ5NDL2 527 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms