RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 AENQ8WTP8 325 aaKnown RBP10.28□□□□□ -0.76
SCN10A-201ENST00000449082 HIST1H2ACQ93077 130 aa10.28□□□□□ -0.76
SCN10A-201ENST00000449082 TIFAQ96CG3 184 aa10.28□□□□□ -0.76
SCN10A-201ENST00000449082 RNFT2Q96EX2 444 aa10.28□□□□□ -0.76
SCN10A-201ENST00000449082 EXOC2Q96KP1 924 aa10.28□□□□□ -0.76
SCN10A-201ENST00000449082 NIFKQ9BYG3 293 aaKnown RBP10.28□□□□□ -0.76
SCN10A-201ENST00000449082 EPB41L4BQ9H329 900 aa10.28□□□□□ -0.76
SCN10A-201ENST00000449082 DDX20Q9UHI6 824 aaKnown RBP10.28□□□□□ -0.76
SCN10A-201ENST00000449082 BAZ2BQ9UIF8 2168 aaKnown RBP10.28□□□□□ -0.76
SCN10A-201ENST00000449082 TBC1D3DA0A087WVF3 549 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 TBC1D3IA0A087WXS9 549 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 TBC1D3EA0A087X179 549 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 TBC1D3KA0A087X1G2 549 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 TBC1D3FA6NER0 549 aaPredicted RBP10.27□□□□□ -0.76
SCN10A-201ENST00000449082 TBC1D3LB9A6J9 549 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 NFATC1O95644 943 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 TBC1D3HP0C7X1 549 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 TFEBP19484 476 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 CYP3A5P20815 502 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 ABCG1P45844 678 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 TSNQ15631 228 aaKnown RBP10.27□□□□□ -0.76
SCN10A-201ENST00000449082 OASLQ15646 514 aaKnown RBP10.27□□□□□ -0.76
SCN10A-201ENST00000449082 XKR6Q5GH73 641 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 TCHHL1Q5QJ38 904 aaPredicted RBP10.27□□□□□ -0.76
SCN10A-201ENST00000449082 WASHC2DQ5SRD0 308 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 OTUD3Q5T2D3 398 aaPredicted RBP10.27□□□□□ -0.76
SCN10A-201ENST00000449082 TBC1D3GQ6DHY5 549 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 TBC1D3CQ6IPX1 549 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 FAM20CQ8IXL6 584 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 TBC1D3Q8IZP1 549 aaPredicted RBP10.27□□□□□ -0.76
SCN10A-201ENST00000449082 MTMR14Q8NCE2 650 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 HDAC7Q8WUI4 952 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 SMG7Q92540 1137 aaKnown RBP10.27□□□□□ -0.76
SCN10A-201ENST00000449082 MYO19Q96H55 970 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 MRPL57Q9BQC6 102 aaKnown RBP10.27□□□□□ -0.76
SCN10A-201ENST00000449082 SPATA5L1Q9BVQ7 753 aa10.27□□□□□ -0.76
SCN10A-201ENST00000449082 SLIT3O75094 1523 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 CCL16O15467 120 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 SEPT4O43236 478 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 ZNF24P17028 368 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 MYL12AP19105 171 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 PIK3R1P27986 724 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 ATP6V0D1P61421 351 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 ATAT1Q5SQI0 421 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 KLHL35Q6PF15 583 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 PRR23CQ6ZRP0 262 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 COPS8Q99627 209 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 DEC1Q9P2X7 70 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 RAB21Q9UL25 225 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 CORO2BQ9UQ03 480 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 TBC1D30Q9Y2I9 924 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 GSAPA4D1B5 854 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 CHURC1-FNTBB4DL54 471 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 TGFB1I1O43294 461 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 ULK1O75385 1050 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 CCNDBP1O95273 360 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 ARMCX4Q5H9R4 360 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 BEND7Q8N7W2 519 aaPredicted RBP10.27□□□□□ -0.77
SCN10A-201ENST00000449082 ACMSDQ8TDX5 336 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 MAML3Q96JK9 1138 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 FANCEQ9HB96 536 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 PCDHB9Q9Y5E1 797 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 RECQL5O94762 991 aaPredicted RBP10.27□□□□□ -0.77
SCN10A-201ENST00000449082 SNHG28P0DPA3 235 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 LRPAP1P30533 357 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 ICAM3P32942 547 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 TAF13Q15543 124 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 POTEHQ6S545 545 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 IZUMO2Q6UXV1 221 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 C16orf62Q7Z3J2 963 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 NDNQ99608 321 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 TBCDQ9BTW9 1192 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 SLITRK2Q9H156 845 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 EXO5Q9H790 373 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 RIPK3Q9Y572 518 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 OTCP00480 354 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 HNRNPH1P31943 449 aaKnown RBP10.27□□□□□ -0.77
SCN10A-201ENST00000449082 MC4RP32245 332 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 RPL7AP62424 266 aaKnown RBP10.27□□□□□ -0.77
SCN10A-201ENST00000449082 PARP15Q460N3 678 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 OLFML2BQ68BL8 750 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 SLC30A9Q6PML9 568 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 CCDC103Q8IW40 242 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 CDRT15Q96T59 188 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 LGMNQ99538 433 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 SEZ6LQ9BYH1 1024 aa10.27□□□□□ -0.77
SCN10A-201ENST00000449082 FAM25AB3EWG3 89 aa10.26□□□□□ -0.77
SCN10A-201ENST00000449082 FAM25CB3EWG5 89 aa10.26□□□□□ -0.77
SCN10A-201ENST00000449082 FAM25GB3EWG6 89 aa10.26□□□□□ -0.77
SCN10A-201ENST00000449082 ABHD2P08910 425 aa10.26□□□□□ -0.77
SCN10A-201ENST00000449082 NUP62P37198 522 aaPredicted RBP10.26□□□□□ -0.77
SCN10A-201ENST00000449082 CDC73Q6P1J9 531 aa10.26□□□□□ -0.77
SCN10A-201ENST00000449082 CNSTQ6PJW8 725 aa10.26□□□□□ -0.77
SCN10A-201ENST00000449082 LCLAT1Q6UWP7 414 aa10.26□□□□□ -0.77
SCN10A-201ENST00000449082 NEK10Q6ZWH5 1172 aa10.26□□□□□ -0.77
SCN10A-201ENST00000449082 STK32CQ86UX6 486 aa10.26□□□□□ -0.77
SCN10A-201ENST00000449082 FAM124AQ86V42 546 aa10.26□□□□□ -0.77
SCN10A-201ENST00000449082 EBNA1BP2Q99848 306 aaKnown RBP10.26□□□□□ -0.77
SCN10A-201ENST00000449082 C9orf16Q9BUW7 83 aa10.26□□□□□ -0.77
SCN10A-201ENST00000449082 REEP1Q9H902 201 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms