RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 NLNQ9BYT8 704 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 SMPD4Q9NXE4 827 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 SLC17A7Q9P2U7 560 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 MRPS7Q9Y2R9 242 aaKnown RBP7.84□□□□□ -1.15
NEDD9-204ENST00000448183 ATP6AP2A0A1C7CYW4 349 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 UBE2QL1A1L167 161 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 ATP6AP2O75787 350 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 UMPSP11172 480 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 CYP2A6P11509 494 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-204ENST00000448183 IDO1P14902 403 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 HOXB6P17509 224 aaKnown RBP7.84□□□□□ -1.15
NEDD9-204ENST00000448183 TNNI3P19429 210 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 BDNFP23560 247 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 FCGRTP55899 365 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 MARSP56192 900 aaKnown RBP7.84□□□□□ -1.15
NEDD9-204ENST00000448183 RPL7AP62424 266 aaKnown RBP7.84□□□□□ -1.15
NEDD9-204ENST00000448183 POLR2LP62875 67 aaKnown RBP7.84□□□□□ -1.15
NEDD9-204ENST00000448183 ZNF554Q86TJ5 538 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 LRRC49Q8IUZ0 686 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 TBC1D21Q8IYX1 336 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 RASGEF1CQ8N431 466 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 LRRC17Q8N6Y2 441 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 CDYL2Q8N8U2 506 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 PCSK9Q8NBP7 692 aaKnown RBP7.84□□□□□ -1.15
NEDD9-204ENST00000448183 PHF10Q8WUB8 498 aaKnown RBP7.84□□□□□ -1.15
NEDD9-204ENST00000448183 MTFMTQ96DP5 389 aaKnown RBP7.84□□□□□ -1.15
NEDD9-204ENST00000448183 S100A14Q9HCY8 104 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 C8orf4Q9NR00 106 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 EURLQ9NYK6 297 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 CORO2BQ9UQ03 480 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 POLR1DQ9Y2S0 133 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 SAMHD1Q9Y3Z3 626 aaKnown RBP7.84□□□□□ -1.15
NEDD9-204ENST00000448183 ARIH1Q9Y4X5 557 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-204ENST00000448183 SGTAO43765 313 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 CCNB1P14635 433 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 NPR3P17342 541 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 CD86P42081 329 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 TTPAP49638 278 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 TAS2R40P59535 323 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 RPL38P63173 70 aaKnown RBP7.83□□□□□ -1.16
NEDD9-204ENST00000448183 CCNIQ14094 377 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 FSCN1Q16658 493 aaKnown RBP7.83□□□□□ -1.16
NEDD9-204ENST00000448183 ZACNQ401N2 412 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 LIN52Q52LA3 116 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 C16orf62Q7Z3J2 963 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 GPR180Q86V85 440 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 TMEM161BQ8NDZ6 487 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 EEF1AKMT1Q8WVE0 214 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 ATL1Q8WXF7 558 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 UBE2E3Q969T4 207 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 SENP8Q96LD8 212 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 NMUR2Q9GZQ4 415 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 CRISPLD1Q9H336 500 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 ZFP14Q9HCL3 533 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 PNPOQ9NVS9 261 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 PTGFRNQ9P2B2 879 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 ANGPT4Q9Y264 503 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 BTRCQ9Y297 605 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 TDRKHQ9Y2W6 561 aaKnown RBP7.83□□□□□ -1.16
NEDD9-204ENST00000448183 FADS3Q9Y5Q0 445 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 ANKDD1BA6NHY2 528 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 TM7SF2O76062 418 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 RECQL4O94761 1208 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 PCDH8O95206 1070 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 PTPN1P18031 435 aaKnown RBP7.83□□□□□ -1.16
NEDD9-204ENST00000448183 SERPINA4P29622 427 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 WEE1P30291 646 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 NTSP30990 170 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 ATP6V0D1P61421 351 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 BNC1Q01954 994 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 USP4Q13107 963 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 KLF10Q13118 480 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 SPIDRQ14159 915 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 PTPRNQ16849 979 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 INSCQ1MX18 579 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 LPCAT4Q643R3 524 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 ADAMTSL2Q86TH1 951 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 PGLYRP2Q96PD5 576 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 SLC38A2Q96QD8 506 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 DHX33Q9H6R0 707 aaKnown RBP7.83□□□□□ -1.16
NEDD9-204ENST00000448183 LRRC4CQ9HCJ2 640 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 TIMMDC1Q9NPL8 285 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 TOR4AQ9NXH8 423 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 TUBA8Q9NY65 449 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-204ENST00000448183 MARCH2Q9P0N8 246 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 PSME2Q9UL46 239 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 ING4Q9UNL4 249 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 HBS1LQ9Y450 684 aaKnown RBP7.83□□□□□ -1.16
NEDD9-204ENST00000448183 FER1L4A9Z1Z3 1794 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 CYP3A7-CYP3A51PA0A087WV96 503 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 BBIP1A8MTZ0 92 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 SLC28A1O00337 649 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 NRP2O60462 931 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 OR6A2O95222 327 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 OTCP00480 354 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 HNRNPLP14866 589 aaKnown RBP eCLIP7.83□□□□□ -1.161e-8■■■□□ 17.8
NEDD9-204ENST00000448183 CYP3A7P24462 503 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 RPL3P39023 403 aaKnown RBP7.83□□□□□ -1.16
NEDD9-204ENST00000448183 MTTPP55157 894 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 HSPA14Q0VDF9 509 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms