RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 SAMD15Q9P1V8 674 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 HS3ST2Q9Y278 367 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 RAI2Q9Y5P3 530 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 RPS6KL1Q9Y6S9 549 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 A0A0U1RQS6 177 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 EXOC1LA0A1B0GW35 172 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 CXorf49A8MYA2 514 aaPredicted RBP25.12■■□□□ 1.61
RFFL-206ENST00000447669 RASGRF2O14827 1237 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 PRLP01236 227 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 NMBRP28336 390 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 GJA4P35212 333 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 NPY2RP49146 381 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 EIF3BP55884 814 aaKnown RBP25.12■■□□□ 1.61
RFFL-206ENST00000447669 MSLNQ13421 630 aaPredicted RBP25.12■■□□□ 1.61
RFFL-206ENST00000447669 KBTBD12Q3ZCT8 623 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 SRLQ86TD4 932 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 CAMK1DQ8IU85 385 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 RYBPQ8N488 228 aaPredicted RBP25.12■■□□□ 1.61
RFFL-206ENST00000447669 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.12■■□□□ 1.61
RFFL-206ENST00000447669 KIAA1958Q8N8K9 716 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 PPP1R2P1Q96PQ5 205 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 TRIB3Q96RU7 358 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 TRMT61BQ9BVS5 477 aaKnown RBP25.12■■□□□ 1.61
RFFL-206ENST00000447669 SLC25A13Q9UJS0 675 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 ERVW-1Q9UQF0 538 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 MYO10Q9HD67 2058 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 TTC34A8MYJ7 566 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 OAS2P29728 719 aaKnown RBP25.12■■□□□ 1.61
RFFL-206ENST00000447669 NSUN2Q08J23 767 aaKnown RBP eCLIP25.12■■□□□ 1.61
RFFL-206ENST00000447669 E2F7Q96AV8 911 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 MRGPRX3Q96LB0 322 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 TDRD1Q9BXT4 1180 aaKnown RBP25.12■■□□□ 1.61
RFFL-206ENST00000447669 IL22Q9GZX6 179 aa25.12■■□□□ 1.61
RFFL-206ENST00000447669 UBE2ZQ9H832 354 aaPredicted RBP25.12■■□□□ 1.61
RFFL-206ENST00000447669 TRIOO75962 3097 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 C2CD4DB7Z1M9 353 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 C1QAP02745 245 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 MYZAPP0CAP1 466 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 PGAM1P18669 254 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 PHBP35232 272 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 OPRD1P41143 372 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 SEPT6Q14141 434 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 CRYMQ14894 314 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 C22orf39Q6P5X5 142 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 Q6ZVU0 165 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 CYP4X1Q8N118 509 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 TTC17Q96AE7 1141 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 VOPP1Q96AW1 172 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 ZNF669Q96BR6 464 aaPredicted RBP25.11■■□□□ 1.61
RFFL-206ENST00000447669 NECTIN4Q96NY8 510 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 ARNT2Q9HBZ2 717 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 DEC1Q9P2X7 70 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 SLC2A6Q9UGQ3 507 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 ATG2BQ96BY7 2078 aa25.11■■□□□ 1.61
RFFL-206ENST00000447669 OPA1O60313 960 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 UGT1A9O60656 530 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 ECI2O75521 394 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 SLC8A1P32418 973 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 GEMIN4P57678 1058 aaKnown RBP25.1■■□□□ 1.61
RFFL-206ENST00000447669 HTR4Q13639 388 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 PTPRNQ16849 979 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 AAK1Q2M2I8 961 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 HSP90B2PQ58FF3 399 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 GOLGA6L1Q8N7Z2 621 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 GSDMBQ8TAX9 411 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 ERLEC1Q96DZ1 483 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 MYO19Q96H55 970 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 FEM1CQ96JP0 617 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 ACSS3Q9H6R3 686 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 UGT1A7Q9HAW7 530 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 UGT1A10Q9HAW8 530 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 UGT1A8Q9HAW9 530 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 EPS15L1Q9UBC2 864 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 KCTD3Q9Y597 815 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 TICRRQ7Z2Z1 1910 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 GOLGA8KD6RF30 607 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 GOLGA8TH3BQL2 631 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 ARNTLO00327 626 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 BUD23O43709 281 aaKnown RBP25.1■■□□□ 1.61
RFFL-206ENST00000447669 RNF40O75150 1001 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 FAM155BO75949 473 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 SLC20A2Q08357 652 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 STAT4Q14765 748 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 CPA6Q8N4T0 437 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 LPCAT1Q8NF37 534 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 GUCD1Q96NT3 240 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 FBRSL1Q9HCM7 1045 aaKnown RBP25.1■■□□□ 1.61
RFFL-206ENST00000447669 PPANQ9NQ55 473 aaKnown RBP25.1■■□□□ 1.61
RFFL-206ENST00000447669 HAUS2Q9NVX0 235 aa25.1■■□□□ 1.61
RFFL-206ENST00000447669 DMC1Q14565 340 aa25.09■■□□□ 1.61
RFFL-206ENST00000447669 PTPRCAPQ14761 206 aa25.09■■□□□ 1.61
RFFL-206ENST00000447669 ANKRD20A4Q4UJ75 823 aa25.09■■□□□ 1.61
RFFL-206ENST00000447669 STEAP4Q687X5 459 aa25.09■■□□□ 1.61
RFFL-206ENST00000447669 ZNF557Q8N988 423 aaPredicted RBP25.09■■□□□ 1.61
RFFL-206ENST00000447669 CHST14Q8NCH0 376 aa25.09■■□□□ 1.61
RFFL-206ENST00000447669 RMDN1Q96DB5 314 aa25.09■■□□□ 1.61
RFFL-206ENST00000447669 SOX13Q9UN79 622 aa25.09■■□□□ 1.61
RFFL-206ENST00000447669 SLC27A6Q9Y2P4 619 aa25.09■■□□□ 1.61
RFFL-206ENST00000447669 ZCWPW2A0A1B0GU75 182 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 MBTPS2O43462 519 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms