RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 HIPK1Q86Z02 1210 aa7.94□□□□□ -1.14
SMG1-202ENST00000446231 OR7G1Q8NGA0 311 aa7.94□□□□□ -1.14
SMG1-202ENST00000446231 HUS1O60921 280 aa7.94□□□□□ -1.14
SMG1-202ENST00000446231 SLC5A2P31639 672 aa7.94□□□□□ -1.14
SMG1-202ENST00000446231 FAM49AQ9H0Q0 323 aaPredicted RBP7.94□□□□□ -1.14
SMG1-202ENST00000446231 CDV3Q9UKY7 258 aaKnown RBP7.94□□□□□ -1.14
SMG1-202ENST00000446231 TISP43B9A030 160 aa7.94□□□□□ -1.14
SMG1-202ENST00000446231 VDRP11473 427 aa7.94□□□□□ -1.14
SMG1-202ENST00000446231 WARSP23381 471 aaKnown RBP7.94□□□□□ -1.14
SMG1-202ENST00000446231 SRP54P61011 504 aaKnown RBP7.94□□□□□ -1.14
SMG1-202ENST00000446231 VPS72Q15906 364 aa7.94□□□□□ -1.14
SMG1-202ENST00000446231 GET4Q7L5D6 327 aaPredicted RBP7.94□□□□□ -1.14
SMG1-202ENST00000446231 RTL3Q8N8U3 475 aaKnown RBP7.94□□□□□ -1.14
SMG1-202ENST00000446231 LRRN4Q8WUT4 740 aa7.94□□□□□ -1.14
SMG1-202ENST00000446231 ZNF486Q96H40 463 aaPredicted RBP7.94□□□□□ -1.14
SMG1-202ENST00000446231 TOR4AQ9NXH8 423 aa7.94□□□□□ -1.14
SMG1-202ENST00000446231 C3orf18Q9UK00 162 aa7.94□□□□□ -1.14
SMG1-202ENST00000446231 UNC13BO14795 1591 aa7.94□□□□□ -1.14
SMG1-202ENST00000446231 G3V2T6 193 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 CDKN2BP42772 138 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 CATSPER4Q7RTX7 472 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 FNDC5Q8NAU1 212 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 MFSD14AQ96MC6 490 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 TRIM54Q9BYV2 358 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 SUCOQ9UBS9 1254 aaKnown RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 CNTNAP2Q9UHC6 1331 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 QRICH2Q9H0J4 1663 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 CAPN14A8MX76 684 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 IDH2P48735 452 aaKnown RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 PWP1Q13610 501 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 FAAH2Q6GMR7 532 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 COLGALT2Q8IYK4 626 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 CENPIQ92674 756 aaPredicted RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 GLT1D1Q96MS3 346 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 SPTBP11277 2137 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 ATP6AP2A0A1C7CYW4 349 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 H0YJX3 145 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 SOX10P56693 466 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 IKBKEQ14164 716 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 FSCN1Q16658 493 aaKnown RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 ANKRD52Q8NB46 1076 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 TOP1MTQ969P6 601 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 FUOMA2VDF0 154 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 VILLO15195 856 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 CABYRO75952 493 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 YES1P07947 543 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 OTOP1Q7RTM1 612 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 PLD5Q8N7P1 536 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 SIK2Q9H0K1 926 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 TLL2Q9Y6L7 1015 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 ZNF335Q9H4Z2 1342 aaPredicted RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 ZNF182P17025 639 aaPredicted RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 SVOPLQ8N434 492 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 PCDHAC1Q9H158 963 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 CYP3A4P08684 503 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 ZNF267Q14586 743 aaPredicted RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 PKN3Q6P5Z2 889 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 CNSTQ6PJW8 725 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 BLOC1S5Q8TDH9 187 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 FCGR1BQ92637 280 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 TMEM176AQ96HP8 235 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 KCNQ5Q9NR82 932 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 RPS6KA6Q9UK32 745 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 TRAF6Q9Y4K3 522 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 ERI2A8K979 691 aaKnown RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 TYROBPO43914 113 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 GSTM5P46439 218 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 PRKCEQ02156 737 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 SLC47A1Q96FL8 570 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 TPK1Q9H3S4 243 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 NOTCH3Q9UM47 2321 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 C1DQ13901 141 aaKnown RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 NR6A1Q15406 480 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 SYCE2Q6PIF2 218 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 VPS37AQ8NEZ2 397 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 MRPL9Q9BYD2 267 aaKnown RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 PRKD2Q9BZL6 878 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 KCNMB3Q9NPA1 279 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 XPNPEP1Q9NQW7 623 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 ZNF112Q9UJU3 913 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 CACNA1BQ00975 2339 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 PGRP06401 933 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 HYIQ5T013 277 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 ELMO1Q92556 727 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 OTUB1Q96FW1 271 aaPredicted RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 SLC4A9Q96Q91 983 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 TRMT6Q9UJA5 497 aaKnown RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 PTPN11Q06124 597 aaPredicted RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 KRT74Q7RTS7 529 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 P2RY8Q86VZ1 359 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 Q96MT0 163 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 ZNF395Q9H8N7 513 aaPredicted RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 RNF146Q9NTX7 359 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 ZDHHC7Q9NXF8 308 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 PTPRZ1P23471 2315 aaPredicted RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 MICAL2O94851 1124 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 LTA4HP09960 611 aaKnown RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 FEN1P39748 380 aaKnown RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 ELMOD2Q8IZ81 293 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 DIRAS2Q96HU8 199 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms