RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 DNAAF5Q86Y56 855 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 MCOLN2Q8IZK6 566 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 SDR16C5Q8N3Y7 309 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 LSM14AQ8ND56 463 aaKnown RBP16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 VOPP1Q96AW1 172 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 DCBLD2Q96PD2 775 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 UBL7Q96S82 380 aaPredicted RBP16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 IL12RB2Q99665 862 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 ABCG4Q9H172 646 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 NOL6Q9H6R4 1146 aaKnown RBP16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 SEPT11Q9NVA2 429 aaKnown RBP16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 FAM170AA1A519 330 aa16.52■□□□□ 0.24
CTDSP1-204ENST00000443891 EME2A4GXA9 379 aaPredicted RBP16.52■□□□□ 0.24
CTDSP1-204ENST00000443891 TK2O00142 265 aa16.52■□□□□ 0.24
CTDSP1-204ENST00000443891 TLX3O43711 291 aaPredicted RBP16.52■□□□□ 0.24
CTDSP1-204ENST00000443891 GJB6O95452 261 aa16.52■□□□□ 0.24
CTDSP1-204ENST00000443891 BLKP51451 505 aa16.52■□□□□ 0.24
CTDSP1-204ENST00000443891 AGERQ15109 404 aa16.52■□□□□ 0.24
CTDSP1-204ENST00000443891 TMEM52BQ4KMG9 183 aa16.52■□□□□ 0.24
CTDSP1-204ENST00000443891 IGF2-ASQ6U949 168 aa16.52■□□□□ 0.24
CTDSP1-204ENST00000443891 OR6K2Q8NGY2 324 aa16.52■□□□□ 0.24
CTDSP1-204ENST00000443891 ZNF641Q96N77 438 aaPredicted RBP16.52■□□□□ 0.24
CTDSP1-204ENST00000443891 MCEEQ96PE7 176 aa16.52■□□□□ 0.24
CTDSP1-204ENST00000443891 NCAPGQ9BPX3 1015 aa16.52■□□□□ 0.24
CTDSP1-204ENST00000443891 NAT10Q9H0A0 1025 aaKnown RBP16.52■□□□□ 0.24
CTDSP1-204ENST00000443891 DOCK9Q9BZ29 2069 aa16.52■□□□□ 0.23
CTDSP1-204ENST00000443891 LY6G6EA0A0G2JKS1 128 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 TSPAN11A1L157 253 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 CFAP69A5D8W1 941 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 EIF4E1BA6NMX2 242 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 SPINT1O43278 529 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 CREB3O43889 395 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 BRINP1O60477 761 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 TCEA3O75764 348 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 MBD3O95983 291 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 XPAP23025 273 aaPredicted RBP16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 GKP32189 559 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 LSSP48449 732 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 CSNK1DP48730 415 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 ERVPABLB-1P60509 514 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 ZNF542PQ5EBM4 170 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 ATXN7L2Q5T6C5 722 aaPredicted RBP16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 BRAT1Q6PJG6 821 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 KDM7AQ6ZMT4 941 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 MACC1Q6ZN28 852 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 APTXQ7Z2E3 356 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 PSTKQ8IV42 348 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 PYROXD2Q8N2H3 581 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 IFI44Q8TCB0 444 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 MAPK15Q8TD08 544 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 NAT6Q93015 286 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 HMCESQ96FZ2 354 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 TUBGCP5Q96RT8 1024 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 MAGEB5Q9BZ81 275 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 PARVAQ9NVD7 372 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 UBA2Q9UBT2 640 aaPredicted RBP16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 APOBEC3BQ9UH17 382 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 U3KQA8 63 aa16.51■□□□□ 0.23
CTDSP1-204ENST00000443891 LMO7DNF2Z398 122 aa16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 TIMP2P16035 220 aa16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 TNFAIP3P21580 790 aa16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 TPI1P60174 286 aa16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 RPL7AP62424 266 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 EIF2B5Q13144 721 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 NCAPHQ15003 741 aa16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 NR0B2Q15466 257 aa16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 LVRNQ6Q4G3 990 aa16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 FSTL5Q8N475 847 aaPredicted RBP16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 ZNF248Q8NDW4 579 aa16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 ATL2Q8NHH9 583 aa16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 LMX1AQ8TE12 382 aa16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 FNIP1Q8TF40 1166 aa16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 BOCQ9BWV1 1114 aa16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 SLC13A1Q9BZW2 595 aa16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 SUV39H2Q9H5I1 410 aa16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 PRORYQ9H606 182 aa16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 LRRC19Q9H756 370 aa16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 POLR1BQ9H9Y6 1135 aa16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 ITM2BQ9Y287 266 aa16.5■□□□□ 0.23
CTDSP1-204ENST00000443891 ARHGAP42A6NI28 874 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 MMP20O60882 483 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 NEBLO76041 1014 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 ANXA6P08133 673 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 GZMAP12544 262 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 ATP1A3P13637 1013 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 IGFALSP35858 605 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 MLLT3P42568 568 aaPredicted RBP16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 UCNP55089 124 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 PCBP4P57723 403 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 PPARDQ03181 441 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 RFTN1Q14699 578 aaPredicted RBP16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 LRRC14Q15048 493 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 CYTH1Q15438 398 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 UGP2Q16851 508 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 C6orf132Q5T0Z8 1188 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 CCDC183Q5T5S1 534 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 PLEKHA7Q6IQ23 1121 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 ERAP2Q6P179 960 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 LEKR1Q6ZMV7 388 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 IRF2BP2Q7Z5L9 587 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms