RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 KRT1P04264 644 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 PRKCGP05129 697 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 RPL22P35268 128 aaKnown RBP7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 MATKP42679 507 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 ATP5OP48047 213 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 SLC6A11P48066 632 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 CACNA2D1P54289 1103 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 SLC7A9P82251 487 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 ARHGEF7Q14155 803 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 GSTA5Q7RTV2 222 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 GPRIN1Q7Z2K8 1008 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 TTC7BQ86TV6 843 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 PRPF39Q86UA1 669 aaKnown RBP7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 XYLT1Q86Y38 959 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 TBC1D31Q96DN5 1066 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 RBM41Q96IZ5 413 aaKnown RBP7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 SERAC1Q96JX3 654 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 CPXM1Q96SM3 734 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 TMEM121Q9BTD3 319 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 FRMD8P1Q9BZ68 369 aaPredicted RBP7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 DENND2DQ9H6A0 471 aaPredicted RBP7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 SUSD2Q9UGT4 822 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 SUFUQ9UMX1 484 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 USH1CQ9Y6N9 552 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 MYLKQ15746 1914 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 A0A1B0GVM2 712 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 TCAF2A6NFQ2 919 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 SPAG7O75391 227 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 PAGE1O75459 146 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 CLDN11O75508 207 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 CYP17A1P05093 508 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 MAT2AP31153 395 aaKnown RBP7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 DAB2P98082 770 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 TUBB3Q13509 450 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 CD300LGQ6UXG3 332 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 Q6ZS52 159 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 ANKRD42Q8N9B4 389 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 PJA1Q8NG27 643 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 MYRFLQ96LU7 910 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 CNPY3Q9BT09 278 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 CINPQ9BW66 212 aaPredicted RBP7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 GPR174Q9BXC1 333 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 CADM1Q9BY67 442 aaKnown RBP7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 C12orf65Q9H3J6 166 aaKnown RBP7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 SAYSD1Q9NPB0 183 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 SAR1AQ9NR31 198 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 MPP6Q9NZW5 540 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 SLC17A7Q9P2U7 560 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 SAE1Q9UBE0 346 aaPredicted RBP7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 OR12D3Q9UGF7 316 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 NME7Q9Y5B8 376 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 CITO14578 2027 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 SCN1AP35498 2009 aa7.48□□□□□ -1.21
CDC42BPA-208ENST00000442054 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 GPR37L1O60883 481 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 EGFP01133 1207 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 ASLP04424 464 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 CALB2P22676 271 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 CA4P22748 312 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 KDELR1P24390 212 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 RFC1P35251 1148 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 MRPS21P82921 87 aaKnown RBP7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 MTAPQ13126 283 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 TAF5Q15542 800 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 PKDCCQ504Y2 493 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 CDHR3Q6ZTQ4 885 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 CIR1Q86X95 450 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 MMAAQ8IVH4 418 aaKnown RBP7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 TMEFF1Q8IYR6 380 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 USP33Q8TEY7 942 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 RMDN1Q96DB5 314 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 ADAM33Q9BZ11 813 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 VPS11Q9H270 941 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 ZDHHC6Q9H6R6 413 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 GPATCH2LQ9NWQ4 482 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 AGO1Q9UL18 857 aaKnown RBP7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 GVINP1Q7Z2Y8 2422 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 KCNU1A8MYU2 1149 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 PAPSS1O43252 624 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 ZNF217O75362 1048 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 TMED2Q15363 201 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 C15orf59Q2T9L4 293 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 SMTNL2Q2TAL5 461 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 C11orf74Q86VG3 221 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 AHI1Q8N157 1196 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 ATPAF2Q8N5M1 289 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 STK32AQ8WU08 396 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 FAF2Q96CS3 445 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 KLHL29Q96CT2 875 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 TBCBQ99426 244 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 PITPNM3Q9BZ71 974 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 ZYG11BQ9C0D3 744 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 ABCG4Q9H172 646 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 C10orf88Q9H8K7 445 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 IL21Q9HBE4 155 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 SMYD2Q9NRG4 433 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 FBXL12Q9NXK8 326 aa7.47□□□□□ -1.21
CDC42BPA-208ENST00000442054 PSMC3IPQ9P2W1 217 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms