RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 CAMK2DQ13557 499 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 ZNF124Q15973 351 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 PKN1Q16512 942 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 TCERG1LQ5VWI1 586 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 IL20RBQ6UXL0 311 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 GLDNQ6ZMI3 551 aaPredicted RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 PRSS45Q7RTY3 260 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 LNX2Q8N448 690 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 DUSP19Q8WTR2 217 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 ZBTB9Q96C00 473 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 FNBP1Q96RU3 617 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 HGH1Q9BTY7 390 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 TEX13AQ9BXU3 409 aaPredicted RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 ADGRE3Q9BY15 652 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 RNF26Q9BY78 433 aaPredicted RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 C2orf40Q9H1Z8 148 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 CYP4F11Q9HBI6 524 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 Q9N2J8 555 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 DUSP22Q9NRW4 184 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 SLC6A13Q9NSD5 602 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 ASNSD1Q9NWL6 643 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 SEMA5BQ9P283 1151 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 ABI3Q9P2A4 366 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 RASAL2Q9UJF2 1139 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 ANAPC5Q9UJX4 755 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 FBXO4Q9UKT5 387 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 SQORQ9Y6N5 450 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 DDX49Q9Y6V7 483 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 TCRBV7S3A2A0A539 114 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 OR6C68A6NDL8 312 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 NPIPB6E9PJ23 425 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 QSOX1O00391 747 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 YY2O15391 372 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 KLHL41O60662 606 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 TJP3O95049 919 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 NXPH3O95157 252 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 FCGR2AP12318 317 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 CCNCP24863 283 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 ALDH1B1P30837 517 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 CNR2P34972 360 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 LIG4P49917 911 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 BLKP51451 505 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 STAT2P52630 851 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 COPB1P53618 953 aaKnown RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 POLR2FP61218 127 aaKnown RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 DMWDQ09019 674 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 TP53BP2Q13625 1128 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 BMPR2Q13873 1038 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 TOB2Q14106 344 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 FGFBP1Q14512 234 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 MFSD13AQ14CX5 517 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 PPA1Q15181 289 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 RNPS1Q15287 305 aaKnown RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 RPE65Q16518 533 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 EDRF1Q3B7T1 1238 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 MMEL1Q495T6 779 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 DENND2CQ68D51 928 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 TATDN1Q6P1N9 297 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 TRAT1Q6PIZ9 186 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 LIMS2Q7Z4I7 341 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 MYOCDQ8IZQ8 938 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 DCLK2Q8N568 766 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 LINC01465Q8N7H1 131 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 BICD2Q8TD16 824 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 BRSK1Q8TDC3 778 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 PIGOQ8TEQ8 1089 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 SIPA1Q96FS4 1042 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 PGBD1Q96JS3 809 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 PBKQ96KB5 322 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 FER1L6-AS2Q96M78 137 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 PAFAH2Q99487 392 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 H2AFJQ9BTM1 129 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 ENTPD7Q9NQZ7 604 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 SETD4Q9NVD3 440 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 PLK2Q9NYY3 685 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 SELENONQ9NZV5 590 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 SH3BP4Q9P0V3 963 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 EPS15L1Q9UBC2 864 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 DKK2Q9UBU2 259 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 CNOT8Q9UFF9 292 aaKnown RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 REXO2Q9Y3B8 237 aaKnown RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 A0A1W2PRG0 241 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 TARSL2A2RTX5 802 aaKnown RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 TTC34A8MYJ7 566 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 AKR1B15C9JRZ8 316 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 ADAMDEC1O15204 470 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 SERPINC1P01008 464 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 HEXAP06865 529 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 TSPY4P0CV99 314 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 TSPY10P0CW01 314 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 NR2F6P10588 404 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 SFTPCP11686 197 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 C6P13671 934 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 APEHP13798 732 aaKnown RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 BUD31P41223 144 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 VPS41P49754 854 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 CAMPP49913 170 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 ZNF84P51523 738 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms