RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 THEGLP0DJG4 465 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 TIMP2P16035 220 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 SERPINB6P35237 376 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 ARRB1P49407 418 aaPredicted RBP13.89□□□□□ -0.19
LTBR-202ENST00000440421 ARSEP51690 589 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 SGCGQ13326 291 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 DPYSL3Q14195 570 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 SHBQ15464 509 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 CFAP58Q5T655 872 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 TMCO4Q5TGY1 634 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 DBX2Q6ZNG2 339 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 GCNT7Q6ZNI0 430 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 IQCHQ86VS3 1027 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 CAMK1DQ8IU85 385 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 ATPAF2Q8N5M1 289 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 PAF1Q8N7H5 531 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 OR13H1Q8NG92 308 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 FAM71BQ8TC56 605 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 WRAP53Q9BUR4 548 aaKnown RBP13.89□□□□□ -0.19
LTBR-202ENST00000440421 SUV39H2Q9H5I1 410 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 RCOR3Q9P2K3 495 aaPredicted RBP13.89□□□□□ -0.19
LTBR-202ENST00000440421 DKK3Q9UBP4 350 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 SEPT3Q9UH03 358 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 LCMT1Q9UIC8 334 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 ANGPTL2Q9UKU9 493 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 TTC24A2A3L6 582 aaPredicted RBP13.88□□□□□ -0.19
LTBR-202ENST00000440421 GOLGA8CPA6NN73 597 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 AREL1O15033 823 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 MFSD11O43934 449 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 MAFKO60675 156 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 MMP20O60882 483 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 MAP3K6O95382 1288 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 PRKCGP05129 697 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 ITGAVP06756 1048 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 KRT7P08729 469 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 MAN1A1P33908 653 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 GRK6P43250 576 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 SCNN1BP51168 640 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 SEMG2Q02383 582 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 OVGP1Q12889 678 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 BNIP3Q12983 259 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 ZNF235Q14590 738 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 RFTN1Q14699 578 aaPredicted RBP13.88□□□□□ -0.19
LTBR-202ENST00000440421 GRM3Q14832 879 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 PDK2Q15119 407 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 ANKRD20A8PQ5CZ79 823 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 NCBP2-AS2Q69YL0 99 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 KDM7AQ6ZMT4 941 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 ZSWIM9Q86XI8 627 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 RHOT2Q8IXI1 618 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 PNPLA1Q8N8W4 532 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 PCDH19Q8TAB3 1148 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 RFFLQ8WZ73 363 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 ZNF599Q96NL3 588 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 TUBGCP5Q96RT8 1024 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 C1QTNF2Q9BXJ5 285 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 ATP13A3Q9H7F0 1226 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 ERVMER34-1Q9H9K5 563 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 PCNX2A6NKB5 2137 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 TRPM6Q9BX84 2022 aa13.88□□□□□ -0.19
LTBR-202ENST00000440421 POM121BA6NF01 834 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 A6NNZ2 444 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 SDC3O75056 442 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 PEX11BO96011 259 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 FTH1P19P0C7X4 201 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 TNNT1P13805 278 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 EPHA8P29322 1005 aaPredicted RBP13.87□□□□□ -0.19
LTBR-202ENST00000440421 SERPINA4P29622 427 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 CSNK1DP48730 415 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 RENBPP51606 427 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 BCL2L1Q07817 233 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 NSUN2Q08J23 767 aaKnown RBP eCLIP13.87□□□□□ -0.19
LTBR-202ENST00000440421 UGP2Q16851 508 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 INAVAQ3KP66 663 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 Q6ZSR6 202 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 PTAR1Q7Z6K3 402 aaPredicted RBP13.87□□□□□ -0.19
LTBR-202ENST00000440421 ABI3BPQ7Z7G0 1075 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 MAP7D3Q8IWC1 876 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 OXR1Q8N573 874 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 BAHD1Q8TBE0 780 aaPredicted RBP13.87□□□□□ -0.19
LTBR-202ENST00000440421 CXorf40AQ8TE69 158 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 SAP25Q8TEE9 199 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 NSMCE1Q8WV22 266 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 RAPGEF5Q92565 580 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 MRFAP1L1Q96HT8 127 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 BMFQ96LC9 184 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 ZNF641Q96N77 438 aaPredicted RBP13.87□□□□□ -0.19
LTBR-202ENST00000440421 PSKH2Q96QS6 385 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 KLF6Q99612 283 aaPredicted RBP13.87□□□□□ -0.19
LTBR-202ENST00000440421 CDC6Q99741 560 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 ZNF670Q9BS34 389 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 CAAP1Q9H8G2 361 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 PCDH12Q9NPG4 1184 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 HYOU1Q9Y4L1 999 aa13.87□□□□□ -0.19
LTBR-202ENST00000440421 SHROOM3Q8TF72 1996 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 TSPAN11A1L157 253 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 LRRD1A4D1F6 860 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 FPGTO14772 594 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 YKT6O15498 198 aa13.86□□□□□ -0.19
LTBR-202ENST00000440421 HYAL3O43820 417 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms