RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SUMO2P61956 95 aaKnown RBP3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 FKBP3Q00688 224 aaKnown RBP3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 COASYQ13057 564 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 RAB32Q13637 225 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 MEA1Q16626 185 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 WHAMMP3Q1A5X7 153 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 SHROOM1Q2M3G4 852 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 USH1GQ495M9 461 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 CCDC40Q4G0X9 1142 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 HERC4Q5GLZ8 1057 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 TEX35Q5T0J7 233 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 PXDC1Q5TGL8 231 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 FKBP1CQ5VVH2 108 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 NCAPH2Q6IBW4 605 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 PGBD2Q6P3X8 592 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 MZT2AQ6P582 158 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 FBXO38Q6PIJ6 1188 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 WDR59Q6PJI9 974 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 TMCO3Q6UWJ1 677 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 FAM160B2Q86V87 743 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 GPBP1Q86WP2 473 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 CATSPER3Q86XQ3 398 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 SUGP1Q8IWZ8 645 aaKnown RBP3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 CCDC170Q8IYT3 715 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 TXLNBQ8N3L3 684 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 SYT2Q8N9I0 419 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 PPHLN1Q8NEY8 458 aaKnown RBP3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 NEK11Q8NG66 645 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 OR6B3Q8NGW1 331 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 CHURC1Q8WUH1 139 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 TRAPPC12Q8WVT3 735 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 XAGE5Q8WWM1 108 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 CRYGNQ8WXF5 182 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 ATG4AQ8WYN0 398 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 DDB2Q92466 427 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 GOLGA1Q92805 767 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 NMD3Q96D46 503 aaKnown RBP3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 C18orf8Q96DM3 657 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 ASB2Q96Q27 587 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 FYTTD1Q96QD9 318 aaKnown RBP3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 RMDN3Q96TC7 470 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 EIF3CQ99613 913 aaKnown RBP3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 NAPGQ99747 312 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 POLR3CQ9BUI4 534 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 ZCWPW1Q9H0M4 648 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 MAGEH1Q9H213 219 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 ZHX3Q9H4I2 956 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 SH2D4AQ9H788 454 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 NHEJ1Q9H9Q4 299 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 AGPAT5Q9NUQ2 364 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 DLL3Q9NYJ7 618 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 PDP2Q9P2J9 529 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 XPR1Q9UBH6 696 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 SERGEFQ9UGK8 458 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 AFF4Q9UHB7 1163 aaKnown RBP3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 CPA4Q9UI42 421 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 GUCA1BQ9UMX6 200 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 MRPL11Q9Y3B7 192 aaKnown RBP3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 ANKRD31Q8N7Z5 1873 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 MYH1P12882 1939 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 A0A0U1RQJ8 604 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 CLRN2A0PK11 232 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 A1L4Q6 167 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 FRMD3A2A2Y4 597 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 CTAGE15A4D2H0 777 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 TRIM43BA6NCK2 446 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 FAM86B1E9PN63 330 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 POC1B-GALNT4F8VUJ3 575 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 PSMD14O00487 310 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 ACKR2O00590 384 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 PDXKO00764 312 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 CETN3O15182 167 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 MSH4O15457 936 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 CALUO43852 315 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 USO1O60763 962 aaKnown RBP3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 SKAP2O75563 359 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 DNAJB5O75953 348 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 FESP07332 822 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 TUBBP07437 444 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 FAM86B2P0C5J1 330 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 DHRS4L1P0CG22 281 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 CTAGE8P0CG41 777 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 DPEP1P16444 411 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 ENGP17813 658 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 RPA1P27694 616 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 HOXA13P31271 388 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 HNRNPH3P31942 346 aaKnown RBP3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 MAGEA1P43355 309 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 STAT2P52630 851 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 PRKAG1P54619 331 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 SLC12A3P55017 1021 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 RPS16P62249 146 aaKnown RBP3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 PSMC6P62333 389 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 KIF5AQ12840 1032 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 MAPK7Q13164 816 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 GIT2Q14161 759 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 SPA17Q15506 151 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 PFKFB4Q16877 469 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 EDRF1Q3B7T1 1238 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 ARL13BQ3SXY8 428 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms